RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SPATC1LQ9H0A9 340 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 TMEM117Q9H0C3 514 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 POLR3FQ9H1D9 316 aaPredicted RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 ISCUQ9H1K1 167 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 C2orf40Q9H1Z8 148 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 PORCNQ9H237 461 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 CARD9Q9H257 536 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 MROH8Q9H579 483 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 ABCB6Q9NP58 842 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 UBE2TQ9NPD8 197 aaPredicted RBP5.98□□□□□ -1.45
PCF11-205ENST00000530906 ZNF302Q9NR11 478 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 C1orf112Q9NSG2 853 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.98□□□□□ -1.45
PCF11-205ENST00000530906 UVRAGQ9P2Y5 699 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 SALL4Q9UJQ4 1053 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 TMEM59LQ9UK28 342 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 AMFRQ9UKV5 643 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 AGTPBP1Q9UPW5 1226 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 SYNGAP1Q96PV0 1343 aa5.98□□□□□ -1.45
PCF11-205ENST00000530906 GOLGA6L10A0A0M3HER8 536 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 FOXN3O00409 490 aaPredicted RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 BUB1O43683 1085 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 OPA1O60313 960 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 SRGAP2O75044 1071 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 SEC31AO94979 1220 aaKnown RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 MYBL1P10243 752 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 TBXAS1P24557 533 aaPredicted RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 ADSSP30520 456 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 ARL2P36404 184 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 GCLMP48507 274 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 LIG4P49917 911 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 PDE6CP51160 858 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 GPC5P78333 572 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 MLLT1Q03111 559 aaPredicted RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 PPP3CAQ08209 521 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 MXD4Q14582 209 aaPredicted RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 PLS1Q14651 629 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 TARBP2Q15633 366 aaKnown RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 SPDYCQ5MJ68 293 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 C1orf220Q5T0J3 134 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 PLA2G4FQ68DD2 849 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 PHLDB3Q6NSJ2 640 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 ELMSAN1Q6PJG2 1045 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 IGF2-ASQ6U949 168 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 C15orf39Q6ZRI6 1047 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 PLPPR4Q7Z2D5 763 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 ARMC9Q7Z3E5 817 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 DAAM2Q86T65 1068 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 NT5DC3Q86UY8 548 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 KRTAP1-3Q8IUG1 177 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 GLYCTKQ8IVS8 523 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 CCDC60Q8IWA6 550 aaPredicted RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 DHX37Q8IY37 1157 aaKnown RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 ANKRD13CQ8N6S4 541 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 C1orf131Q8NDD1 294 aaKnown RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 CCDC26Q8TAB7 109 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 DEPTORQ8TB45 409 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 LNX1Q8TBB1 728 aaPredicted RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 SCFD2Q8WU76 684 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 SEPT1Q8WYJ6 367 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 POMGNT1Q8WZA1 660 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 MYO19Q96H55 970 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 WNK4Q96J92 1243 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 VCPIP1Q96JH7 1222 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 MEGF10Q96KG7 1140 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.97□□□□□ -1.45
PCF11-205ENST00000530906 FAM124BQ9H5Z6 455 aaPredicted RBP5.97□□□□□ -1.45
PCF11-205ENST00000530906 AZI2Q9H6S1 392 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 XPNPEP1Q9NQW7 623 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 RAB20Q9NX57 234 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 GTF3C4Q9UKN8 822 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 TFR2Q9UP52 801 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 STXBP5LQ9Y2K9 1186 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 SLC45A1Q9Y2W3 748 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 SCN4AP35499 1836 aa5.97□□□□□ -1.45
PCF11-205ENST00000530906 DNAJC25-GNG10A0A024R161 153 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 CCDC66A2RUB6 948 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 ASB14A6NK59 587 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 LRRIQ3A6PVS8 624 aaPredicted RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 K7ERI5 159 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 DLL1O00548 723 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 KCNK3O14649 394 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 ZNF185O15231 689 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 ASAP2O43150 1006 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 ADCY3O60266 1144 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 MAFO75444 373 aaPredicted RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 FARP2O94887 1054 aaPredicted RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 FTCDO95954 541 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 ADRB2P07550 413 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 RARAP10276 462 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 UBA1P22314 1058 aaKnown RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 OAS2P29728 719 aaKnown RBP5.96□□□□□ -1.46
PCF11-205ENST00000530906 STAT5BP51692 787 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 NRLP54845 237 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 CCNA1P78396 465 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 CDR2Q01850 454 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 POU5F1BQ06416 359 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 C2orf54Q08AI8 447 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 PPFIA1Q13136 1202 aa5.96□□□□□ -1.46
PCF11-205ENST00000530906 PRPF4BQ13523 1007 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms