RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 CRB2Q5IJ48 1285 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 NPNTQ6UXI9 565 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 DBX2Q6ZNG2 339 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 ZNF365Q70YC5 407 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 VRK3Q8IV63 474 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 KIAA0319LQ8IZA0 1049 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 FAM9AQ8IZU1 332 aaPredicted RBP3.34□□□□□ -1.87
PTPN11-203ENST00000530818 SLC17A8Q8NDX2 589 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 CPEB3Q8NE35 698 aaKnown RBP3.34□□□□□ -1.87
PTPN11-203ENST00000530818 NLGN4YQ8NFZ3 816 aaPredicted RBP3.34□□□□□ -1.87
PTPN11-203ENST00000530818 FUBP1Q96AE4 644 aaKnown RBP3.34□□□□□ -1.87
PTPN11-203ENST00000530818 MRGPRX1Q96LB2 322 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 ARMT1Q9H993 441 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 METTL14Q9HCE5 456 aaKnown RBP3.34□□□□□ -1.87
PTPN11-203ENST00000530818 NMRK2Q9NPI5 230 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 TMEM74BQ9NUR3 256 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 SIDT1Q9NXL6 827 aaKnown RBP3.34□□□□□ -1.87
PTPN11-203ENST00000530818 CHPF2Q9P2E5 772 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 ANKFY1Q9P2R3 1169 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 STAP2Q9UGK3 403 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 TCEAL9Q9UHQ7 104 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 PCDHA6Q9UN73 950 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 ATP11BQ9Y2G3 1177 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 HS3ST3A1Q9Y663 406 aa3.34□□□□□ -1.87
PTPN11-203ENST00000530818 CFAP65Q6ZU64 1925 aaKnown RBP3.34□□□□□ -1.88
PTPN11-203ENST00000530818 TNIKQ9UKE5 1360 aa3.34□□□□□ -1.88
PTPN11-203ENST00000530818 POLR2AP24928 1970 aaKnown RBP3.34□□□□□ -1.88
PTPN11-203ENST00000530818 KIF27Q86VH2 1401 aa3.34□□□□□ -1.88
PTPN11-203ENST00000530818 UNC119BA6NIH7 251 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 RNASET2O00584 256 aaKnown RBP3.33□□□□□ -1.88
PTPN11-203ENST00000530818 SPDEFO95238 335 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 RPLP2P05387 115 aaKnown RBP3.33□□□□□ -1.88
PTPN11-203ENST00000530818 C6P13671 934 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 TACR2P21452 398 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 GATA3P23771 443 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 PIK3CGP48736 1102 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 RAB1AP62820 205 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 EXOSC9Q06265 439 aaKnown RBP3.33□□□□□ -1.88
PTPN11-203ENST00000530818 KLF10Q13118 480 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 TP53BP2Q13625 1128 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 HABP2Q14520 560 aaPredicted RBP3.33□□□□□ -1.88
PTPN11-203ENST00000530818 KIF22Q14807 665 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 MINDY4Q4G0A6 757 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 THEMIS2Q5TEJ8 643 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.33□□□□□ -1.88
PTPN11-203ENST00000530818 CHST15Q7LFX5 561 aaPredicted RBP3.33□□□□□ -1.88
PTPN11-203ENST00000530818 GPR149Q86SP6 731 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 DENND1CQ8IV53 801 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 ARHGEF19Q8IW93 802 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 CFAP52Q8N1V2 620 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 PDPRQ8NCN5 879 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 FBXO41Q8TF61 875 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 HAS1Q92839 578 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 SLC35A4Q96G79 324 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 B3GNT5Q9BYG0 378 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 ZNF341Q9BYN7 854 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 NRDE2Q9H7Z3 1164 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 ZMAT3Q9HA38 289 aaKnown RBP3.33□□□□□ -1.88
PTPN11-203ENST00000530818 GPR35Q9HC97 309 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 OBP2AQ9NY56 170 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 ING1Q9UK53 422 aaPredicted RBP3.33□□□□□ -1.88
PTPN11-203ENST00000530818 L1RE1Q9UN81 338 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 STXBP5LQ9Y2K9 1186 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 FPGT-TNNI3KV9GXZ4 949 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 USP19O94966 1318 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 UACAQ9BZF9 1416 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 ADAMTSL3P82987 1691 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 BCORL1Q5H9F3 1711 aa3.33□□□□□ -1.88
PTPN11-203ENST00000530818 GAGE12BA1L429 117 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 GAGE12HA6NDE8 117 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 VSTM5A8MXK1 200 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 DNAJB5O75953 348 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 SUN1O94901 812 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ARIH2O95376 493 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 GPANK1O95872 356 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 SLPIP03973 132 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 FTH1P19P0C7X4 201 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 EGR2P11161 476 aaPredicted RBP3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ALAS1P13196 640 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 NPR1P16066 1061 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 LAG3P18627 525 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 SMARCA1P28370 1054 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ZEB1P37275 1124 aaPredicted RBP3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ARFIP2P53365 341 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 PSMC1P62191 440 aaKnown RBP3.32□□□□□ -1.88
PTPN11-203ENST00000530818 CXADRP78310 365 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 TCF15Q12870 199 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ARHGAP29Q52LW3 1261 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 PCSK4Q6UW60 755 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 PPP1R32Q7Z5V6 425 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 USP37Q86T82 979 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 PDSS2Q86YH6 399 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ULK2Q8IYT8 1036 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 CAMKK1Q8N5S9 505 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 SLC16A11Q8NCK7 471 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 POC1BQ8TC44 478 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 ASB10Q8WXI3 467 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 TNPO1Q92973 898 aaKnown RBP3.32□□□□□ -1.88
PTPN11-203ENST00000530818 TIFAQ96CG3 184 aa3.32□□□□□ -1.88
PTPN11-203ENST00000530818 BOD1Q96IK1 185 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms