RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 CACNG4Q9UBN1 327 aa6.14□□□□□ -1.43
CTSB-216ENST00000530290 EVLQ9UI08 416 aaPredicted RBP6.14□□□□□ -1.43
CTSB-216ENST00000530290 KCNG1Q9UIX4 513 aa6.14□□□□□ -1.43
CTSB-216ENST00000530290 PCDHB8Q9UN66 801 aa6.14□□□□□ -1.43
CTSB-216ENST00000530290 TNFSF13BQ9Y275 285 aa6.14□□□□□ -1.43
CTSB-216ENST00000530290 MSRB2Q9Y3D2 182 aa6.14□□□□□ -1.43
CTSB-216ENST00000530290 ADAMTS20P59510 1910 aa6.14□□□□□ -1.43
CTSB-216ENST00000530290 CABIN1Q9Y6J0 2220 aa6.14□□□□□ -1.43
CTSB-216ENST00000530290 NAV2Q8IVL1 2488 aa6.14□□□□□ -1.43
CTSB-216ENST00000530290 LAMA5O15230 3695 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 ITPR1Q14643 2758 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 SMIM28A0A1B0GU29 152 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 LNP1A1A4G5 178 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 XPOTO43592 962 aaKnown RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 NEMFO60524 1076 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 CDC45O75419 566 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 REC8O95072 547 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 OAZ2O95190 189 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 SEC24AO95486 1093 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 MCF2P10911 925 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 CYP11B2P19099 503 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 ATP2B1P20020 1258 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 MARCKSP29966 332 aaPredicted RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 MCM4P33991 863 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 HSPA4P34932 840 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 ALDH1A3P47895 512 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 CREB5Q02930 508 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 YWHAHQ04917 246 aaPredicted RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 RING1Q06587 406 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 GPR17Q13304 367 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 VEPH1Q14D04 833 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 PON2Q15165 354 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 PDGFRLQ15198 375 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 KYAT1Q16773 422 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 ZNF423Q2M1K9 1284 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 ZNF568Q3ZCX4 644 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 GLRA4Q5JXX5 417 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 SPDYCQ5MJ68 293 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 SH3PXD2AQ5TCZ1 1133 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 PMS2CLQ68D20 193 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 TXNDC11Q6PKC3 985 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 ALKAL1Q6UXT8 129 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 CDR2LQ86X02 465 aaPredicted RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 TMC8Q8IU68 726 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 NOSTRINQ8IVI9 506 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 ARID3BQ8IVW6 561 aaPredicted RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 C3orf58Q8NDZ4 430 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 C2orf15Q8WU43 125 aaKnown RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 DDX12PQ92771 950 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 ZSWIM3Q96MP5 696 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 SCNM1Q9BWG6 230 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 MRPL4Q9BYD3 311 aaKnown RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 TASP1Q9H6P5 420 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 TTC12Q9H892 705 aaPredicted RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 C17orf75Q9HAS0 396 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 RBM12Q9NTZ6 932 aaKnown RBP6.13□□□□□ -1.43
CTSB-216ENST00000530290 CEP72Q9P209 647 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 CNTN3Q9P232 1028 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 GDAQ9Y2T3 454 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 STK24Q9Y6E0 443 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 OBSL1O75147 1896 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 PTPRDP23468 1912 aa6.13□□□□□ -1.43
CTSB-216ENST00000530290 FREM2Q5SZK8 3169 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 A0A1W2PRU2 124 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 ARHGEF35A5YM69 484 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 FAM221BA6H8Z2 402 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 COL6A6A6NMZ7 2263 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 C4orf47A7E2U8 309 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 M0QZQ0 153 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 NCANO14594 1321 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 EXTL3O43909 919 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 TYMPP19971 482 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 CYP3A5P20815 502 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 SCP2P22307 547 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 BRCC3P46736 316 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 SOX9P48436 509 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 TUFMP49411 452 aaKnown RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 AARSP49588 968 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTSB-216ENST00000530290 ARPP19P56211 112 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 CCT2P78371 535 aaKnown RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 TCHHQ07283 1943 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 DMP1Q13316 513 aaPredicted RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 BYSLQ13895 437 aaKnown RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 ZNF268Q14587 947 aaPredicted RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 HSF5Q4G112 596 aaPredicted RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 USP39Q53GS9 565 aaKnown RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 SOWAHCQ53LP3 525 aaPredicted RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 POTEHQ6S545 545 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 CD300LGQ6UXG3 332 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 PIK3AP1Q6ZUJ8 805 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 CYP2U1Q7Z449 544 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 USP37Q86T82 979 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 PROSER1Q86XN7 944 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 HS6ST3Q8IZP7 471 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 KIAA1958Q8N8K9 716 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 SPACA7Q96KW9 195 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 ACAP3Q96P50 834 aa6.12□□□□□ -1.43
CTSB-216ENST00000530290 POLR3CQ9BUI4 534 aaPredicted RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 NUSAP1Q9BXS6 441 aaKnown RBP6.12□□□□□ -1.43
CTSB-216ENST00000530290 LRRC3Q9BY71 257 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms