RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 SLC15A4Q8N697 577 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 OR14K1Q8NGZ2 314 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 STYXQ8WUJ0 223 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 USP13Q92995 863 aaPredicted RBP7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 RPL10LQ96L21 214 aaKnown RBP7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 KCNK12Q9HB15 430 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 GPR35Q9HC97 309 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 NECTIN3Q9NQS3 549 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 RGL1Q9NZL6 768 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 NCDNQ9UBB6 729 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 SLC45A2Q9UMX9 530 aa7.53□□□□□ -1.2
CAPRIN1-208ENST00000530008 J3KRW8 73 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 RHOBTB3O94955 611 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 GRPP07492 148 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 TNFAIP3P21580 790 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 IL1R2P27930 398 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 UCP3P55916 312 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 HGFACQ04756 655 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 LRP8Q14114 963 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 TAF12Q16514 161 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 TBR1Q16650 682 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 AOPEPQ8N6M6 819 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 CCDC150Q8NCX0 1101 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 NLGN4YQ8NFZ3 816 aaPredicted RBP7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 SLC35B2Q8TB61 432 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 FNIP1Q8TF40 1166 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 DDX17Q92841 729 aaKnown RBP7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 SPATA25Q9BR10 227 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 TMEM168Q9H0V1 697 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 GCM1Q9NP62 436 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 MID2Q9UJV3 735 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 SCINQ9Y6U3 715 aa7.52□□□□□ -1.21
CAPRIN1-208ENST00000530008 ZNF785A8K8V0 405 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 EYA2O00167 538 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 IPO5O00410 1097 aaKnown RBP7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 HYAL3O43820 417 aaPredicted RBP7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 RASSF9O75901 435 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 HAUS5O94927 633 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 A1BGP04217 495 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 CASP2P42575 452 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 DUSP8Q13202 625 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 MRPL49Q13405 166 aaKnown RBP7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 ZMAT1Q5H9K5 638 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 CRB2Q5IJ48 1285 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 INTS11Q5TA45 600 aaKnown RBP7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 BORAQ6PGQ7 559 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 PRR23BQ6ZRT6 265 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 UBE3BQ7Z3V4 1068 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 MAATS1Q7Z4T9 603 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 YAF2Q8IY57 180 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 TMEFF1Q8IYR6 380 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 FAM168AQ92567 244 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 SPSB4Q96A44 273 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 GPHA2Q96T91 129 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 FAM167BQ9BTA0 163 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.51□□□□□ -1.215e-14■□□□□ 9
CAPRIN1-208ENST00000530008 TMEM8AQ9HCN3 771 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 HDAC9Q9UKV0 1011 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 CRYL1Q9Y2S2 319 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 TMX2Q9Y320 296 aa7.51□□□□□ -1.21
CAPRIN1-208ENST00000530008 A0A087WZ62 844 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 MYO1CO00159 1063 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 PIP5K1BO14986 540 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 PJA2O43164 708 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 AMHP03971 560 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 ANXA1P04083 346 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 ITGA5P08648 1049 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 SNRPA1P09661 255 aaKnown RBP7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 ZNF135P52742 658 aaPredicted RBP7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 COPAP53621 1224 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 NPEPPSP55786 919 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 TIGD6Q17RP2 521 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 TANGO2Q6ICL3 276 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 LIN54Q6MZP7 749 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 KRT28Q7Z3Y7 464 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 USP37Q86T82 979 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 STT3BQ8TCJ2 826 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 ZNF384Q8TF68 577 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 SNX27Q96L92 541 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 TINAGL1Q9GZM7 467 aaPredicted RBP7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 BARX1Q9HBU1 254 aaPredicted RBP7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 ADAM29Q9UKF5 820 aa7.5□□□□□ -1.21
CAPRIN1-208ENST00000530008 CYP1A1P04798 512 aaPredicted RBP7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 ALAS1P13196 640 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 BTF3P20290 206 aaKnown RBP7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 RAP2BP61225 183 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 DLX2Q07687 328 aaPredicted RBP7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 FSTL1Q12841 308 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 ARHGAP15Q53QZ3 475 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 HYIQ5T013 277 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 UTP14CQ5TAP6 766 aaKnown RBP7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 ARL6IP4Q66PJ3 421 aaKnown RBP7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 USP49Q70CQ1 688 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 KLHL36Q8N4N3 616 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 SCAMP4Q969E2 229 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 EID2BQ96D98 161 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 KATNAL1Q9BW62 490 aa7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 MS4A7Q9GZW8 240 aaPredicted RBP7.49□□□□□ -1.21
CAPRIN1-208ENST00000530008 IL23AQ9NPF7 189 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms