RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 SLC8B1Q6J4K2 584 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 RNF19BQ6ZMZ0 732 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 WDR5BQ86VZ2 330 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 MFSD6LQ8IWD5 586 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ELMOD1Q8N336 334 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF461Q8TAF7 563 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 DEPDC1BQ8WUY9 529 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 C18orf25Q96B23 403 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF512Q96ME7 567 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 LRRC3BQ96PB8 259 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 HHIPQ96QV1 700 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ADPGKQ9BRR6 497 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 IER2Q9BTL4 223 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 EDEM2Q9BV94 578 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 NFKBIZQ9BYH8 718 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 FZD8Q9H461 694 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 AVENQ9NQS1 362 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 FBXL5Q9UKA1 691 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 YIPF1Q9Y548 306 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 TIMM13Q9Y5L4 95 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 RALGAPA1Q6GYQ0 2036 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ZMYM2Q9UBW7 1377 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CACNA1EQ15878 2313 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 SMIM28A0A1B0GU29 152 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 C4orf47A7E2U8 309 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 TMEM189-UBE2V1I3L0A0 370 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 TRAPPC3O43617 180 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CDC45O75419 566 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ABLIM3O94929 683 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ZIC2O95409 532 aaPredicted RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 BAG4O95429 457 aaKnown RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 PRAMEF12O95522 483 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF806P0C7X5 589 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ATF2P15336 505 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 GCFC2P16383 781 aaKnown RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CNR2P34972 360 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 LIMK1P53667 647 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CYP4F8P98187 520 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CREB5Q02930 508 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 POU5F1BQ06416 359 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CCINQ13939 588 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CALCRLQ16602 461 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 SEZ6Q53EL9 994 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 SH3PXD2AQ5TCZ1 1133 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 NT5DC1Q5TFE4 455 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CACNA2D4Q7Z3S7 1137 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 TCEAL8Q8IYN2 117 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 DEPTORQ8TB45 409 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 GAB3Q8WWW8 586 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ZCCHC14Q8WYQ9 949 aaKnown RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 PRIMPOLQ96LW4 560 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ZMAT2Q96NC0 199 aaKnown RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 HSD17B14Q9BPX1 270 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 LSM14BQ9BX40 385 aaKnown RBP3.87□□□□□ -1.79
PTPRC-213ENST00000529828 AGXT2Q9BYV1 514 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CCDC113Q9H0I3 377 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 CRISPLD1Q9H336 500 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 ANKEF1Q9NU02 776 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 INVSQ9Y283 1065 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 NUB1Q9Y5A7 615 aa3.87□□□□□ -1.79
PTPRC-213ENST00000529828 HELZ2Q9BYK8 2649 aaKnown RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 KALRNO60229 2985 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ASH1LQ9NR48 2969 aaKnown RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 MYBPHLA2RUH7 354 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SRRM3A6NNA2 597 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ACKR2O00590 384 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 DPYSL4O14531 572 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 CHADO15335 359 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 FOXD2O60548 495 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 MED24O75448 989 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 PAPSS2O95340 614 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 LYPLA2O95372 231 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 VNN2O95498 520 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 MCM4P33991 863 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 HSPA4P34932 840 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SLC19A1P41440 591 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 RAP1GAPP47736 663 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 RING1Q06587 406 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SPAG1Q07617 926 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 FAM187BQ17R55 369 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 UAP1L1Q3KQV9 507 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 DCAF4L1Q3SXM0 396 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF568Q3ZCX4 644 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 BMP2KLQ5H9B9 411 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 DGKKQ5KSL6 1271 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 PLA2G2CQ5R387 149 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 C6orf132Q5T0Z8 1188 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ATF7IP2Q5U623 682 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ERICH6BQ5W0A0 696 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TRIM68Q6AZZ1 485 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 GALNT17Q6IS24 598 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF280DQ6N043 979 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TMC8Q8IU68 726 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 ARID3BQ8IVW6 561 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SLFN12Q8IYM2 578 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TTC9BQ8N6N2 239 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 TTC16Q8NEE8 873 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 UROC1Q96N76 676 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 SCNM1Q9BWG6 230 aa3.86□□□□□ -1.79
PTPRC-213ENST00000529828 DNAJC25Q9H1X3 360 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms