RNA–Protein interactions for RNA: ENST00000528555.5

SNX19-207, Transcript of sorting nexin 19, humanhuman

TSL 2 BASIC

Gene SNX19, Length 1,506 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-207ENST00000528555 MRPL43Q8N983 215 aaKnown RBP18.28■□□□□ 0.52
SNX19-207ENST00000528555 PABPC5Q96DU9 382 aaKnown RBP18.28■□□□□ 0.52
SNX19-207ENST00000528555 UROC1Q96N76 676 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 CDCA3Q99618 268 aaPredicted RBP18.28■□□□□ 0.52
SNX19-207ENST00000528555 CXCL16Q9H2A7 254 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 PDE11AQ9HCR9 933 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 MARCH5Q9NX47 278 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 CNTN3Q9P232 1028 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 PLXNA4Q9HCM2 1894 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.28■□□□□ 0.52
SNX19-207ENST00000528555 CTSAP10619 480 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 TNFSF9P41273 254 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 NRIP1P48552 1158 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 CLDN10P78369 228 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 SURF1Q15526 300 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 NAB2Q15742 525 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 MEA1Q16626 185 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 SLC10A6Q3KNW5 377 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 GLRA4Q5JXX5 417 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 ADGRD2Q7Z7M1 963 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 TSPAN18Q96SJ8 248 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 ZBP1Q9H171 429 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 IGFLR1Q9H665 355 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 UBE2ZQ9H832 354 aaPredicted RBP18.28■□□□□ 0.52
SNX19-207ENST00000528555 FBXL5Q9UKA1 691 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 CPSF3Q9UKF6 684 aaKnown RBP18.28■□□□□ 0.52
SNX19-207ENST00000528555 DAAM1Q9Y4D1 1078 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 PCDHGC5Q9Y5F6 944 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.28■□□□□ 0.52
SNX19-207ENST00000528555 FHOD1Q9Y613 1164 aa18.28■□□□□ 0.52
SNX19-207ENST00000528555 CASTOR2A6NHX0 329 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 TADA2AO75478 443 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 CXCL14O95715 111 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 HNRNPH3P31942 346 aaKnown RBP18.27■□□□□ 0.51
SNX19-207ENST00000528555 MRPS5P82675 430 aaKnown RBP18.27■□□□□ 0.51
SNX19-207ENST00000528555 SFMBT2Q5VUG0 894 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 WDR59Q6PJI9 974 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 SV2AQ7L0J3 742 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 LMO3Q8TAP4 145 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 SYN2Q92777 582 aaPredicted RBP18.27■□□□□ 0.51
SNX19-207ENST00000528555 DDX27Q96GQ7 796 aaKnown RBP18.27■□□□□ 0.51
SNX19-207ENST00000528555 SPAG5Q96R06 1193 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 CHP1Q99653 195 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 CGRRF1Q99675 332 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.51
SNX19-207ENST00000528555 RRAGDQ9NQL2 400 aaPredicted RBP18.27■□□□□ 0.51
SNX19-207ENST00000528555 CLDND1Q9NY35 253 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 APEX2Q9UBZ4 518 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 ADAM28Q9UKQ2 775 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 SSX2IPQ9Y2D8 614 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 IRAK3Q9Y616 596 aa18.27■□□□□ 0.51
SNX19-207ENST00000528555 CCP110O43303 1012 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 SOD2P04179 222 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 CXCL8P10145 99 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 WNT7BP56706 349 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 CDK17Q00537 523 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 POU5F1Q01860 360 aaKnown RBP18.26■□□□□ 0.51
SNX19-207ENST00000528555 DUSP6Q16828 381 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 CTC1Q2NKJ3 1217 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 E4F1Q66K89 784 aaPredicted RBP18.26■□□□□ 0.51
SNX19-207ENST00000528555 IQCEQ6IPM2 695 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 GJB7Q6PEY0 223 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 RAD9BQ6WBX8 426 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 RBM23Q86U06 439 aaKnown RBP18.26■□□□□ 0.51
SNX19-207ENST00000528555 CD302Q8IX05 232 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 EFHBQ8N7U6 833 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 FBXL13Q8NEE6 735 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 FAM212AQ96EL1 285 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 HERC2P3Q9BVR0 1158 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 VN1R3Q9BXE9 311 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 MYO6Q9UM54 1294 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 COQ4Q9Y3A0 265 aa18.26■□□□□ 0.51
SNX19-207ENST00000528555 TDRD15B5MCY1 1934 aaKnown RBP18.25■□□□□ 0.51
SNX19-207ENST00000528555 C2orf71A6NGG8 1288 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 HIDE1A8MVS5 230 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 EFEMP2O95967 443 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 RFX1P22670 979 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 CA8P35219 290 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 AP3M2P53677 418 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 ADAM15Q13444 863 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 RAPGEF1Q13905 1077 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 MTF1Q14872 753 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 ASIC2Q16515 512 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 LMBRD2Q68DH5 695 aaPredicted RBP18.25■□□□□ 0.51
SNX19-207ENST00000528555 DCLRE1AQ6PJP8 1040 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 EP400NLQ6ZTU2 488 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 RNF168Q8IYW5 571 aaPredicted RBP18.25■□□□□ 0.51
SNX19-207ENST00000528555 CCAR2Q8N163 923 aaKnown RBP18.25■□□□□ 0.51
SNX19-207ENST00000528555 ZNF516Q92618 1163 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 ZMAT2Q96NC0 199 aaKnown RBP18.25■□□□□ 0.51
SNX19-207ENST00000528555 MRPL17Q9NRX2 175 aaKnown RBP18.25■□□□□ 0.51
SNX19-207ENST00000528555 KCND1Q9NSA2 647 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 SPTLC3Q9NUV7 552 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 RAB20Q9NX57 234 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 TRMT1Q9NXH9 659 aaKnown RBP18.25■□□□□ 0.51
SNX19-207ENST00000528555 DNAJC12Q9UKB3 198 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 COL6A3P12111 3177 aa18.25■□□□□ 0.51
SNX19-207ENST00000528555 SF3B1O75533 1304 aaKnown RBP eCLIP18.25■□□□□ 0.512e-7■■■■■ 129.2
SNX19-207ENST00000528555 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.24■□□□□ 0.51
SNX19-207ENST00000528555 TMEM189-UBE2V1I3L0A0 370 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms