RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 NCDNQ9UBB6 729 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 MAPK8IP1Q9UQF2 711 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 PHLPP2Q6ZVD8 1323 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 TRIP11Q15643 1979 aa22.76■■□□□ 1.23
PKP3-205ENST00000527442 LRRIQ4A6NIV6 560 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 FAM170BA6NMN3 283 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 TTLL13PA6NNM8 815 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 SPTLC1O15269 473 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 XYLBO75191 536 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 CSTF1Q05048 431 aaKnown RBP22.75■■□□□ 1.23
PKP3-205ENST00000527442 NAB2Q15742 525 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 VARS2Q5ST30 1063 aaKnown RBP22.75■■□□□ 1.23
PKP3-205ENST00000527442 L1TD1Q5T7N2 865 aaKnown RBP22.75■■□□□ 1.23
PKP3-205ENST00000527442 PPP4R3CPQ6ZMV5 832 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 NPAS3Q8IXF0 933 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 DEPTORQ8TB45 409 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 KIFC3Q9BVG8 833 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 OSBPL6Q9BZF3 934 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 C2orf40Q9H1Z8 148 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 RWDD2AQ9UIY3 292 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 CTNND2Q9UQB3 1225 aa22.75■■□□□ 1.23
PKP3-205ENST00000527442 CACNA1BQ00975 2339 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 PRPF6O94906 941 aaKnown RBP22.74■■□□□ 1.23
PKP3-205ENST00000527442 CCNE1P24864 410 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 ZCWPW2Q504Y3 356 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 ZC2HC1CQ53FD0 456 aaPredicted RBP22.74■■□□□ 1.23
PKP3-205ENST00000527442 CENPPQ6IPU0 288 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 KLHL10Q6JEL2 608 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 MAP4K3Q8IVH8 894 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 NELFBQ8WX92 580 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 ING5Q8WYH8 240 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 PDZD7Q9H5P4 517 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 TMEM134Q9H6X4 195 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 SNTG2Q9NY99 539 aa22.74■■□□□ 1.23
PKP3-205ENST00000527442 BICDL2A1A5D9 508 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 IKBKBO14920 756 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 RECQL4O94761 1208 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 POU2F2P09086 479 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 TARSP26639 723 aaKnown RBP22.73■■□□□ 1.23
PKP3-205ENST00000527442 HOXD13P35453 343 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 EFNA5P52803 228 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 PFKPQ01813 784 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 IQCB1Q15051 598 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 KNOP1Q1ED39 458 aaKnown RBP22.73■■□□□ 1.23
PKP3-205ENST00000527442 PABPC1LQ4VXU2 614 aaKnown RBP22.73■■□□□ 1.23
PKP3-205ENST00000527442 ZBTB8OSQ8IWT0 167 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 ENOX1Q8TC92 643 aaKnown RBP22.73■■□□□ 1.23
PKP3-205ENST00000527442 PRIMPOLQ96LW4 560 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 MED15Q96RN5 788 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 CCDC113Q9H0I3 377 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 KCTD10Q9H3F6 313 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 CBX8Q9HC52 389 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 PRMT7Q9NVM4 692 aaPredicted RBP22.73■■□□□ 1.23
PKP3-205ENST00000527442 DNMT3BQ9UBC3 853 aaKnown RBP22.73■■□□□ 1.23
PKP3-205ENST00000527442 PCDHGA2Q9Y5H1 932 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 COL4A2P08572 1712 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 EPG5Q9HCE0 2579 aa22.73■■□□□ 1.23
PKP3-205ENST00000527442 KMT2BQ9UMN6 2715 aaPredicted RBP22.73■■□□□ 1.23
PKP3-205ENST00000527442 THP07101 528 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 IGFBP6P24592 240 aaPredicted RBP22.72■■□□□ 1.23
PKP3-205ENST00000527442 OR1D2P34982 312 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 MYL5Q02045 173 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 LRRC63Q05C16 580 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 RAB33AQ14088 237 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 TTI2Q6NXR4 508 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 RSPO2Q6UXX9 243 aaPredicted RBP22.72■■□□□ 1.23
PKP3-205ENST00000527442 TPRG1Q6ZUI0 275 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 TAS1R3Q7RTX0 852 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 ZBTB44Q8NCP5 570 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 ACCSQ96QU6 501 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 FZD8Q9H461 694 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 TMEM206Q9H813 350 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 TBX20Q9UMR3 447 aa22.72■■□□□ 1.23
PKP3-205ENST00000527442 SMG5Q9UPR3 1016 aaKnown RBP22.72■■□□□ 1.23
PKP3-205ENST00000527442 MAGEA9P43362 315 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 KCNA1Q09470 495 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 ELAVL2Q12926 359 aaKnown RBP22.71■■□□□ 1.23
PKP3-205ENST00000527442 ZBTB41Q5SVQ8 909 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 PDXDC1Q6P996 788 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 TSSK4Q6SA08 328 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.71■■□□□ 1.23
PKP3-205ENST00000527442 DHX40Q8IX18 779 aaKnown RBP22.71■■□□□ 1.23
PKP3-205ENST00000527442 NELFCDQ8IXH7 590 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 ATRIPQ8WXE1 791 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 NELL1Q92832 810 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 CLDN23Q96B33 292 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 CNTNAP3BQ96NU0 1288 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 CNTNAP3Q9BZ76 1288 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 ZSCAN32Q9NX65 697 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 MTRRQ9UBK8 725 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 EXOC7Q9UPT5 735 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 USP20Q9Y2K6 914 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 SPTBN2O15020 2390 aa22.71■■□□□ 1.23
PKP3-205ENST00000527442 PDXKO00764 312 aa22.7■■□□□ 1.22
PKP3-205ENST00000527442 N4BP3O15049 544 aa22.7■■□□□ 1.22
PKP3-205ENST00000527442 LILRB5O75023 590 aa22.7■■□□□ 1.22
PKP3-205ENST00000527442 PIGRP01833 764 aa22.7■■□□□ 1.22
PKP3-205ENST00000527442 EDN1P05305 212 aa22.7■■□□□ 1.22
PKP3-205ENST00000527442 FGFR3P22607 806 aa22.7■■□□□ 1.22
PKP3-205ENST00000527442 PMS1P54277 932 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms