RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 EHBP1Q8NDI1 1231 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 ZNF397Q8NF99 534 aaPredicted RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 URGCPQ8TCY9 931 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 SUSD6Q92537 303 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 ZFP42Q96MM3 310 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 GAD1Q99259 594 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 POP1Q99575 1024 aaKnown RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 TMEM175Q9BSA9 504 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 CRACR2AQ9BSW2 395 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 LSM14BQ9BX40 385 aaKnown RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 NXF3Q9H4D5 531 aaKnown RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 ASB7Q9H672 318 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 TOPORSQ9NS56 1045 aaPredicted RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 GCNT4Q9P109 453 aa13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 USP15Q9Y4E8 981 aaPredicted RBP13.66□□□□□ -0.22
SSSCA1-203ENST00000526877 LACTBL1A8MY62 500 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 AKR1B15C9JRZ8 316 aaPredicted RBP13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 GPR37L1O60883 481 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 LILRB3O75022 631 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 PHACTR2O75167 634 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 CXCL8P10145 99 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 PON1P27169 355 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 KLK7P49862 253 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 DUOXA2Q1HG44 320 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 NT5DC4Q86YG4 428 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 CNGA4Q8IV77 575 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 CPLX3Q8WVH0 158 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 AUTS2Q8WXX7 1259 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 ANKRD36BP1Q96IX9 119 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 LRFN3Q9BTN0 628 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 EDEM3Q9BZQ6 932 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 PLEKHA5Q9HAU0 1116 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 PLCB1Q9NQ66 1216 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 FAM207AQ9NSI2 230 aaPredicted RBP13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 MARCH5Q9NX47 278 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 FAN1Q9Y2M0 1017 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 GIT1Q9Y2X7 761 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 LUC7L2Q9Y383 392 aaKnown RBP13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 HCFC2Q9Y5Z7 792 aa13.65□□□□□ -0.22
SSSCA1-203ENST00000526877 A0A1W2PQJ5 194 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 LOC730098B7Z3J9 87 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 NRDCO43847 1150 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 TNNC2P02585 160 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 C4BPAP04003 597 aaKnown RBP13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 TMEM191BP0C7N4 346 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 SLC9A1P19634 815 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 COL9A1P20849 921 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 AKAP5P24588 427 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 CASP14P31944 242 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 MLH1P40692 756 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 SCNN1GP51170 649 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 BIRC3Q13489 604 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 SLC10A6Q3KNW5 377 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 LMBRD2Q68DH5 695 aaPredicted RBP13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 LLGL2Q6P1M3 1020 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 SV2AQ7L0J3 742 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 CACNA2D4Q7Z3S7 1137 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 RNF168Q8IYW5 571 aaPredicted RBP13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 FBXL13Q8NEE6 735 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 SLC22A17Q8WUG5 538 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 ZNF516Q92618 1163 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 FAM193BQ96PV7 902 aaPredicted RBP13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 TSPAN18Q96SJ8 248 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 APOL6Q9BWW8 343 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 INTS2Q9H0H0 1204 aaKnown RBP13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 PARP2Q9UGN5 583 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 CAPN11Q9UMQ6 739 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 COQ4Q9Y3A0 265 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 DAAM1Q9Y4D1 1078 aa13.64□□□□□ -0.23
SSSCA1-203ENST00000526877 TTC26A0AVF1 554 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 GYPCP04921 128 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 HOXB8P17481 243 aaPredicted RBP13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 WNT7BP56706 349 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 CBX2Q14781 532 aaPredicted RBP13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 PTPN14Q15678 1187 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 ZACNQ401N2 412 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 HS1BP3Q53T59 392 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 TRIM65Q6PJ69 517 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 C15orf39Q6ZRI6 1047 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 TAS1R1Q7RTX1 841 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 CASP10Q92851 521 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 PHF7Q9BWX1 381 aaPredicted RBP13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 RAB20Q9NX57 234 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 CEP72Q9P209 647 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 DERAQ9Y315 318 aa13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 PDCD11Q14690 1871 aaKnown RBP13.63□□□□□ -0.23
SSSCA1-203ENST00000526877 TRIOO75962 3097 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 F8W810 466 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 XPOTO43592 962 aaKnown RBP13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 MFAP3LO75121 409 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 RECQL4O94761 1208 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 ALADP13716 330 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 RFX1P22670 979 aa13.62□□□□□ -0.23
SSSCA1-203ENST00000526877 KRT9P35527 623 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms