RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 KCNE1P15382 129 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 SPINK2P20155 84 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 PI4KAP42356 2102 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 NOVA1P51513 510 aaKnown RBP13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 EFNA5P52803 228 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 APBB1IPQ7Z5R6 666 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 TMEM130Q8N3G9 435 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 IFT74Q96LB3 600 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 ORC3Q9UBD5 711 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 MAFFQ9ULX9 164 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 PCDHGA5Q9Y5G8 931 aa13.65□□□□□ -0.22
CCDC90B-205ENST00000525916 PHLPP2Q6ZVD8 1323 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 K7ERI5 159 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 DPYSL4O14531 572 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 MEFVO15553 781 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 PRAMEF12O95522 483 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 RPL9P32969 192 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 MCM2P49736 904 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 FOSBP53539 338 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 ZNF252P-AS1Q0IIN9 211 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 FOXC1Q12948 553 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 ACAP1Q15027 740 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 GAREM2Q75VX8 874 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 SYNPOQ8N3V7 929 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 APPL2Q8NEU8 664 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 BEST2Q8NFU1 509 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 ZSCAN31Q96LW9 406 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 ACO2Q99798 780 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 POLR3CQ9BUI4 534 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 EDEM2Q9BV94 578 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 PTPRHQ9HD43 1115 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 POLR3BQ9NW08 1133 aaPredicted RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 CNTN3Q9P232 1028 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 SCN1AP35498 2009 aa13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-205ENST00000525916 ZFYVE26Q68DK2 2539 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 CEP192Q8TEP8 1941 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 ADAMTS9Q9P2N4 1935 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 CCDC163A0A0D9SF12 145 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 BTBD18B2RXH4 712 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 CD2BP2O95400 341 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 HARSP12081 509 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 EPHB3P54753 998 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 ST3GAL1Q11201 340 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 DUSP4Q13115 394 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 PLD1Q13393 1074 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 PLK5Q496M5 336 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 GPR158Q5T848 1215 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 TTC9BQ8N6N2 239 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 KDF1Q8NAX2 398 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 ACAP3Q96P50 834 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 TARS2Q9BW92 718 aaKnown RBP13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 TMEM121BQ9BXQ6 578 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 ATXN3LQ9H3M9 355 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 VPS45Q9NRW7 570 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 TUBGCP4Q9UGJ1 667 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 SLC8A2Q9UPR5 921 aa13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 TIMM13Q9Y5L4 95 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-205ENST00000525916 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 FASNP49327 2511 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 AKAP13Q12802 2813 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 PCNX2A6NKB5 2137 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 CCDC169A6NNP5 214 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 SOAT2O75908 522 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 TOP3BO95985 862 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 FDPSP14324 419 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 RPA1P27694 616 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 GABRR2P28476 465 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 MCM7P33993 719 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 CYP4F8P98187 520 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 YWHAHQ04917 246 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 ITPRIPL2Q3MIP1 535 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 FSTL4Q6MZW2 842 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 BPIFB1Q8TDL5 484 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 WASF1Q92558 559 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 KIFAP3Q92845 792 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 ZC3H10Q96K80 434 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 HHIPQ96QV1 700 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 TMEM209Q96SK2 561 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 ADAM33Q9BZ11 813 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 OBP2AQ9NY56 170 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 WASF3Q9UPY6 502 aa13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 HELZP42694 1942 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-205ENST00000525916 C4orf47A7E2U8 309 aa13.61□□□□□ -0.23
CCDC90B-205ENST00000525916 ABLIM1O14639 778 aa13.61□□□□□ -0.23
CCDC90B-205ENST00000525916 AKAP3O75969 853 aa13.61□□□□□ -0.23
CCDC90B-205ENST00000525916 MCF2P10911 925 aa13.61□□□□□ -0.23
CCDC90B-205ENST00000525916 ALDH1A3P47895 512 aa13.61□□□□□ -0.23
CCDC90B-205ENST00000525916 PEX3P56589 373 aa13.61□□□□□ -0.23
CCDC90B-205ENST00000525916 ECM1Q16610 540 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms