RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 TCF15Q12870 199 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 TIGD2Q4W5G0 525 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 FOXR2Q6PJQ5 311 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 SYNE4Q8N205 404 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 FAM43AQ8N2R8 423 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 FAM156AQ8NDB6 213 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 NSUN7Q8NE18 718 aaKnown RBP5.5□□□□□ -1.53
CD44-215ENST00000525241 TIFAQ96CG3 184 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 MLST8Q9BVC4 326 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 TINAGL1Q9GZM7 467 aaPredicted RBP5.5□□□□□ -1.53
CD44-215ENST00000525241 MRPS18AQ9NVS2 196 aaKnown RBP5.5□□□□□ -1.53
CD44-215ENST00000525241 RNF181Q9P0P0 153 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 CTTNBP2NLQ9P2B4 639 aa5.5□□□□□ -1.53
CD44-215ENST00000525241 PPFIA4O75335 1185 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 ZNF202O95125 648 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 CHEK2O96017 543 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 NPR1P16066 1061 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 PIGFQ07326 219 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 ZNF844Q08AG5 666 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 CNN3Q15417 329 aaKnown RBP5.49□□□□□ -1.53
CD44-215ENST00000525241 CYP2A13Q16696 494 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 ARMC6Q6NXE6 501 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 PPP1R32Q7Z5V6 425 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 USP37Q86T82 979 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 ARHGEF19Q8IW93 802 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 ANKS1AQ92625 1134 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 FUBP1Q96AE4 644 aaKnown RBP5.49□□□□□ -1.53
CD44-215ENST00000525241 RNF31Q96EP0 1072 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 ALOXE3Q9BYJ1 711 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 C22orf23Q9BZE7 217 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 PIH1D1Q9NWS0 290 aaKnown RBP5.49□□□□□ -1.53
CD44-215ENST00000525241 GEMIN8Q9NWZ8 242 aaKnown RBP5.49□□□□□ -1.53
CD44-215ENST00000525241 ETAA1Q9NY74 926 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 MTO1Q9Y2Z2 717 aaKnown RBP5.49□□□□□ -1.53
CD44-215ENST00000525241 NOX1Q9Y5S8 564 aa5.49□□□□□ -1.53
CD44-215ENST00000525241 A0A1W2PPL8 197 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 MYADML2A6NDP7 307 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 UNC119BA6NIH7 251 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 PHGDHO43175 533 aaKnown RBP5.48□□□□□ -1.53
CD44-215ENST00000525241 ERN1O75460 977 aaKnown RBP5.48□□□□□ -1.53
CD44-215ENST00000525241 DNAJB5O75953 348 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 CDKL5O76039 1030 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 SUN1O94901 812 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 KIF20AO95235 890 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 SPDEFO95238 335 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 GNAI2P04899 355 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 KITP10721 976 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 C6P13671 934 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 KCNA2P16389 499 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 RHCEP18577 417 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 MAKP20794 623 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 FDXRP22570 491 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 ARFIP2P53365 341 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 RHDQ02161 417 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 SCAPQ12770 1279 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 SPDYE7PQ495Y7 208 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 HSP90AB2PQ58FF8 381 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 TAPT1Q6NXT6 567 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 APOA5Q6Q788 366 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 TMPRSS9Q7Z410 1059 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 IL31RAQ8NI17 732 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 PROKR1Q8TCW9 393 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 DDX17Q92841 729 aaKnown RBP5.48□□□□□ -1.53
CD44-215ENST00000525241 TRIB1Q96RU8 372 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 P2RX7Q99572 595 aaKnown RBP5.48□□□□□ -1.53
CD44-215ENST00000525241 CNPPD1Q9BV87 410 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 BHMT2Q9H2M3 363 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 GALNT9Q9HCQ5 603 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 CNNM1Q9NRU3 951 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 ANKFY1Q9P2R3 1169 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 MED16Q9Y2X0 877 aa5.48□□□□□ -1.53
CD44-215ENST00000525241 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.48□□□□□ -1.53
CD44-215ENST00000525241 CCDC195A0A1B0GUA6 201 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 A0A1W2PS29 197 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 CFAP69A5D8W1 941 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 POLRMTO00411 1230 aaKnown RBP5.47□□□□□ -1.53
CD44-215ENST00000525241 ABHD16AO95870 558 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 KCNJ5P48544 419 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 TOB1P50616 345 aaPredicted RBP5.47□□□□□ -1.53
CD44-215ENST00000525241 CACNB3P54284 484 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 MXRA7P84157 204 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 ZXDAP98168 799 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 GUCY1B3Q02153 619 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 TP53BP2Q13625 1128 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 GEN1Q17RS7 908 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 KIAA0753Q2KHM9 967 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 LY6G5CQ5SRR4 150 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 RNF220Q5VTB9 566 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 KCNV1Q6PIU1 500 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 CCDC149Q6ZUS6 474 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 PCSK9Q8NBP7 692 aaKnown RBP5.47□□□□□ -1.53
CD44-215ENST00000525241 POC1BQ8TC44 478 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 KBTBD7Q8WVZ9 684 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 SMOQ99835 787 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 TRIM54Q9BYV2 358 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 SIK2Q9H0K1 926 aa5.47□□□□□ -1.53
CD44-215ENST00000525241 UNKLQ9H9P5 680 aaKnown RBP5.47□□□□□ -1.53
CD44-215ENST00000525241 DDX21Q9NR30 783 aaKnown RBP eCLIP5.47□□□□□ -1.53
CD44-215ENST00000525241 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.47□□□□□ -1.53
CD44-215ENST00000525241 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms