RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 LRIT3Q3SXY7 679 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 CT47A1Q5JQC4 288 aaPredicted RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 HABP4Q5JVS0 413 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 SPOUT1Q5T280 376 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 SCARA5Q6ZMJ2 495 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 INTS8Q75QN2 995 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 RNF168Q8IYW5 571 aaPredicted RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 LRRC43Q8N309 656 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 BEST2Q8NFU1 509 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 SPPL3Q8TCT6 385 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 URGCPQ8TCY9 931 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 ARNTL2Q8WYA1 636 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 TIFAQ96CG3 184 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 IGSF21Q96ID5 467 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 FNBP1Q96RU3 617 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 MRPL45Q9BRJ2 306 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 TUBGCP2Q9BSJ2 902 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 SMYD3Q9H7B4 428 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 UBN1Q9NPG3 1134 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 HMGXB4Q9UGU5 601 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 DACH1Q9UI36 760 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 UBQLN1Q9UMX0 589 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 L1RE1Q9UN81 338 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 FAN1Q9Y2M0 1017 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 DERAQ9Y315 318 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 C2CD2Q9Y426 696 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 VWA8A3KMH1 1905 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 MYO9BQ13459 2157 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 REV3LO60673 3130 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 LRRC10BA6NIK2 292 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 DLL1O00548 723 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 AP1G2O75843 785 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 B3GAT3O94766 335 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 NOL4O94818 638 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 VNN2O95498 520 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 AFPP02771 609 aaKnown RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 ALDH2P05091 517 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 KRT19P08727 400 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 OR4Q2P0C623 313 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 TMEM191BP0C7N4 346 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 PNMA6AP0CW24 399 aaPredicted RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 KRT13P13646 458 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 CYP3A5P20815 502 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 GTF2F1P35269 517 aaKnown RBP eCLIP6.98□□□□□ -1.29
CD44-214ENST00000525211 LILRA4P59901 499 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 RBM10P98175 930 aaKnown RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 MYL7Q01449 175 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 BIRC3Q13489 604 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 NCOA4Q13772 614 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 HSP90AA2PQ14568 343 aaPredicted RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 MAN2A1Q16706 1144 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 KYAT1Q16773 422 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 SOWAHAQ2M3V2 549 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 VWA3BQ502W6 1294 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 RTP2Q5QGT7 225 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 WSCD1Q658N2 575 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 PHLDB3Q6NSJ2 640 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 FUT10Q6P4F1 479 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 PRSS55Q6UWB4 352 aaPredicted RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 LIMS2Q7Z4I7 341 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 APBB1IPQ7Z5R6 666 aaPredicted RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 ADGRD2Q7Z7M1 963 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 CD302Q8IX05 232 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 HACE1Q8IYU2 909 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 KBTBD7Q8WVZ9 684 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 RSPH1Q8WYR4 309 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 ANKRD36BP1Q96IX9 119 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 SENP8Q96LD8 212 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 KREMEN1Q96MU8 473 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 ZNF558Q96NG5 402 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 TWNKQ96RR1 684 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 TGS1Q96RS0 853 aaKnown RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 TMEM175Q9BSA9 504 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 INTS2Q9H0H0 1204 aaKnown RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 MTIF3Q9H2K0 278 aaKnown RBP6.98□□□□□ -1.29
CD44-214ENST00000525211 NDST4Q9H3R1 872 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 PRDM12Q9H4Q4 367 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 TMEM8AQ9HCN3 771 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 KANSL3Q9P2N6 904 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 SIK3Q9Y2K2 1263 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 COQ4Q9Y3A0 265 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.98□□□□□ -1.29
CD44-214ENST00000525211 NLRC5Q86WI3 1866 aa6.98□□□□□ -1.29
CD44-214ENST00000525211 COL4A4P53420 1690 aaPredicted RBP6.97□□□□□ -1.29
CD44-214ENST00000525211 EYSQ5T1H1 3165 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 GOLGA8CPA6NN73 597 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 LGALS16A8MUM7 142 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 HIDE1A8MVS5 230 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 C5orf67F2Z3F1 127 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 TMEM189-UBE2V1I3L0A0 370 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 FSCN2O14926 492 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 ATP2C2O75185 946 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 TADA2AO75478 443 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 ASS1P00966 412 aaKnown RBP6.97□□□□□ -1.29
CD44-214ENST00000525211 TNNC2P02585 160 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 WEE2P0C1S8 567 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 LAG3P18627 525 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 FGFR3P22607 806 aa6.97□□□□□ -1.29
CD44-214ENST00000525211 ACAT1P24752 427 aaKnown RBP6.97□□□□□ -1.29
CD44-214ENST00000525211 LMO2P25791 158 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms