RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SLCO4C1Q6ZQN7 724 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 EP400NLQ6ZTU2 488 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 DENND5BQ6ZUT9 1274 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 HFE2Q6ZVN8 426 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 CPLX4Q7Z7G2 160 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 GLRX5Q86SX6 157 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 TTC7BQ86TV6 843 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 CCDC103Q8IW40 242 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 OR52K2Q8NGK3 314 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 CTCFLQ8NI51 663 aaPredicted RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 KCNG4Q8TDN1 519 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 GRK7Q8WTQ7 553 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 DEPDC1BQ8WUY9 529 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 NRG4Q8WWG1 115 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 RTF1Q92541 710 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 TBC1D5Q92609 795 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 MTFMTQ96DP5 389 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 SUCLG2Q96I99 432 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 ZNF830Q96NB3 372 aaPredicted RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 FAM210AQ96ND0 272 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 CORO1BQ9BR76 489 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 TWSG1Q9GZX9 223 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 SOX17Q9H6I2 414 aaPredicted RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 GPRC5CQ9NQ84 441 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 INCENPQ9NQS7 918 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 AIPL1Q9NZN9 384 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 C6orf203Q9P0P8 240 aaPredicted RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 FBXL21Q9UKT6 434 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 SMG5Q9UPR3 1016 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 SF3B6Q9Y3B4 125 aaKnown RBP4.87□□□□□ -1.63
CD44-213ENST00000525209 RAD54L2Q9Y4B4 1467 aa4.87□□□□□ -1.63
CD44-213ENST00000525209 KRBA1A5PL33 1030 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 CLCA1A8K7I4 914 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 A8MXE2 369 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 FANCGO15287 622 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 EIF4EBP3O60516 100 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 KINO60870 393 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 CLASP2O75122 1294 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 CSPG5O95196 566 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 CLEC3BP05452 202 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 ANXA2P07355 339 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 HEXBP07686 556 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 DLDP09622 509 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 EPXP11678 715 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 NPR1P16066 1061 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 PDE6AP16499 860 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 RXRAP19793 462 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 TLX1P31314 330 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 PSMC4P43686 418 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 AARSP49588 968 aaKnown RBP eCLIP4.86□□□□□ -1.63
CD44-213ENST00000525209 MXI1P50539 228 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 ARFIP1P53367 373 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 SLC12A3P55017 1021 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 JAM2P57087 298 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 PCBP4P57723 403 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 RNF4P78317 190 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 GSTM4Q03013 218 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 FSTL1Q12841 308 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 COASYQ13057 564 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 KCNAB2Q13303 367 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 SMAD4Q13485 552 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 IL10RAQ13651 578 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 TBCEQ15813 527 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 ZNF827Q17R98 1081 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 TCP11X2Q5H9J9 407 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 C10orf76Q5T2E6 689 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 TMEM132EQ6IEE7 984 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 CCDC62Q6P9F0 684 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 ELMSAN1Q6PJG2 1045 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 KLHL24Q6TFL4 600 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 PLEKHM3Q6ZWE6 761 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 TMC6Q7Z403 805 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 OSTM1Q86WC4 334 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 CCDC117Q8IWD4 279 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 DIS3L2Q8IYB7 885 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 C10orf53Q8N6V4 93 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 USHBP1Q8N6Y0 703 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 DENND6BQ8NEG7 585 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 CHST13Q8NET6 341 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 ANKRD20A12PQ8NF67 263 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 SMCR8Q8TEV9 937 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 TSPEARQ8WU66 669 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 ANKRD49Q8WVL7 239 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 CTNNBL1Q8WYA6 563 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 KAT5Q92993 513 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 CUL5Q93034 780 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 ATP6V0A1Q93050 837 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 HDAC10Q969S8 669 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 NMD3Q96D46 503 aaKnown RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 WDR89Q96FK6 387 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 SLC35A4Q96G79 324 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 BTBD6Q96KE9 485 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 AK8Q96MA6 479 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 DPH2Q9BQC3 489 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 CRACR2AQ9BSW2 395 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 MCMBPQ9BTE3 642 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 ACE2Q9BYF1 805 aaPredicted RBP4.86□□□□□ -1.63
CD44-213ENST00000525209 NRSN2Q9GZP1 204 aa4.86□□□□□ -1.63
CD44-213ENST00000525209 C1orf21Q9H246 121 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms