RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 HOXC6P09630 235 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 PLS3P13797 630 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 HOXC12P31275 282 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 MPLP40238 635 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 ADCY7P51828 1080 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 RBM5P52756 815 aaKnown RBP eCLIP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 INF2Q27J81 1249 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 DPY19L1Q2PZI1 675 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 TKFCQ3LXA3 575 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 SLC10A5Q5PT55 438 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 HLA-DQA1Q5Y7H0 255 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 E4F1Q66K89 784 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 TTLL5Q6EMB2 1281 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 ZNF530Q6P9A1 599 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 DCLRE1AQ6PJP8 1040 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 CEP68Q76N32 757 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 ADAT2Q7Z6V5 191 aaKnown RBP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 DDX53Q86TM3 631 aaKnown RBP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 PRPF38AQ8NAV1 312 aaKnown RBP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 TMEM145Q8NBT3 493 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 KLHDC9Q8NEP7 349 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 ATP8B4Q8TF62 1192 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 CEP89Q96ST8 783 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 FEZ1Q99689 392 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 UNKQ9C0B0 810 aaKnown RBP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 SLC6A17Q9H1V8 727 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 GPR108Q9NPR9 543 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 ARHGEF3Q9NR81 526 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 VPS45Q9NRW7 570 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 TYW1Q9NV66 732 aaKnown RBP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 FAM53CQ9NYF3 392 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 DONSONQ9NYP3 566 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 KLHL14Q9P2G3 628 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 GPR160Q9UJ42 338 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 FBXL7Q9UJT9 491 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 BSNQ9UPA5 3926 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 PCNX2A6NKB5 2137 aa3.86□□□□□ -1.79
CSDE1-209ENST00000525132 NSD1Q96L73 2696 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-209ENST00000525132 A0A087X0B3 334 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 SSU72P8A0A1W2PR75 194 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 RNF212BA8MTL3 300 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 DBHP09172 617 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 C6orf222P0C671 652 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-209ENST00000525132 FNTBP49356 437 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 STARD6P59095 220 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 MTAPQ13126 283 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 LAPTM5Q13571 262 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 TCEA2Q15560 299 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 C21orf62-AS1Q17RA5 79 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 PRSS53Q2L4Q9 553 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 MTERF2Q49AM1 385 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 C2orf27AQ580R0 203 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 ODR4Q5SWX8 454 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 YOD1Q5VVQ6 348 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-209ENST00000525132 FOXB2Q5VYV0 432 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 Q71RC1 249 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-209ENST00000525132 MCUQ8NE86 351 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 PLEKHO2Q8TD55 490 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 MORC4Q8TE76 937 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 THAP3Q8WTV1 239 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-209ENST00000525132 RSAD2Q8WXG1 361 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 KISS1RQ969F8 398 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-209ENST00000525132 PPP2R3CQ969Q6 453 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 CCDC136Q96JN2 1154 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 CCDC140Q96MF4 163 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 LZTS2Q9BRK4 669 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 ZNF341Q9BYN7 854 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 SLC52A2Q9HAB3 445 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 GPRC5CQ9NQ84 441 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 HOMER2Q9NSB8 354 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 RBPJLQ9UBG7 517 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 PFDN2Q9UHV9 154 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 TAF6LQ9Y6J9 622 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 SMCHD1A6NHR9 2005 aa3.85□□□□□ -1.79
CSDE1-209ENST00000525132 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.84□□□□□ -1.792e-6■■■■□ 23.8
CSDE1-209ENST00000525132 ZANQ9Y493 2812 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 TRBV23OR9-2A0A075B6M9 112 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 LRRC10BA6NIK2 292 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 NOP56O00567 594 aaKnown RBP3.84□□□□□ -1.79
CSDE1-209ENST00000525132 HTATSF1O43719 755 aaKnown RBP3.84□□□□□ -1.79
CSDE1-209ENST00000525132 ASMTLO95671 621 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 TSPAN15O95858 294 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 MMP1P03956 469 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 WEE2P0C1S8 567 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 IQCF3P0C7M6 154 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 CYP2C9P11712 490 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 PRKCAP17252 672 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 GLDCP23378 1020 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 DNAJB1P25685 340 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 L1CAMP32004 1257 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 CTNNB1P35222 781 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 TECP42680 631 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 HTRA4P83105 476 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-209ENST00000525132 KCNAB2Q13303 367 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 UBXN2BQ14CS0 331 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 LONRF2Q1L5Z9 754 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 TCTN1Q2MV58 587 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 SV2CQ496J9 727 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 ANKRD54Q6NXT1 300 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 TMED8Q6PL24 325 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms