RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 M0QZQ0 153 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 SLC16A3O15427 465 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 TGM5O43548 720 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 TRAPPC3O43617 180 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 HUS1O60921 280 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 LILRB3O75022 631 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 TBX10O75333 385 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 RFPL2O75678 378 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 SEC24AO95486 1093 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 AFPP02771 609 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 PNMA6AP0CW24 399 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CCDC192P0DO97 292 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ODC1P11926 461 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 PRKCSHP14314 528 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CPB1P15086 417 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 SLC9A1P19634 815 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 KCNA5P22460 613 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ERCC5P28715 1186 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 PPP1R2P41236 205 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 FMO5P49326 533 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 AARSP49588 968 aaKnown RBP eCLIP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 GPR15P49685 360 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 NDUFV1P49821 464 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 KLK7P49862 253 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ZNF165P49910 485 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 MXI1P50539 228 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CLCN4P51793 760 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 TNNC1P63316 161 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CLDN10P78369 228 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 YWHAHQ04917 246 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 UBE3AQ05086 875 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 KCNH2Q12809 1159 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 MYO1EQ12965 1108 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 MYBPC2Q14324 1141 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 NCAPHQ15003 741 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 DUSP6Q16828 381 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 SKOR2Q2VWA4 1001 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ZACNQ401N2 412 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 SLC39A12Q504Y0 691 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ZNF667Q5HYK9 610 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 RARS2Q5T160 578 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 SDHAF4Q5VUM1 108 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 OVOS1Q6IE37 1185 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 GPR153Q6NV75 609 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 TMC5Q6UXY8 1006 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 RNF19BQ6ZMZ0 732 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 C15orf39Q6ZRI6 1047 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 RRAGAQ7L523 313 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 DPH6Q7L8W6 267 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 FRMD5Q7Z6J6 570 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 USP37Q86T82 979 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 LRRTM3Q86VH5 581 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 METTL23Q86XA0 190 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ARHGEF19Q8IW93 802 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 TRIM59Q8IWR1 403 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 DHX40Q8IX18 779 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ADGRF2Q8IZF7 708 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 LRRC52Q8N7C0 313 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ATAD1Q8NBU5 361 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 OR6B3Q8NGW1 331 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ENOX1Q8TC92 643 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 GPR152Q8TDT2 470 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 SLC22A17Q8WUG5 538 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 KBTBD7Q8WVZ9 684 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 PIK3R5Q8WYR1 880 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 KAT5Q92993 513 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 ZNF560Q96MR9 790 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CEP63Q96MT8 703 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 MKNK1Q9BUB5 465 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 EMILIN2Q9BXX0 1053 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 GTPBP4Q9BZE4 634 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 LMAN2LQ9H0V9 348 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CRISPLD1Q9H336 500 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 DPEP3Q9H4B8 488 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 THAP9Q9H5L6 903 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CBX8Q9HC52 389 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 TMEM8AQ9HCN3 771 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CHST7Q9NS84 486 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 RAB20Q9NX57 234 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 DDX43Q9NXZ2 648 aaKnown RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 CLEC1BQ9P126 229 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 MAGEC2Q9UBF1 373 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 MTRRQ9UBK8 725 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 DACH1Q9UI36 760 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 FBXL5Q9UKA1 691 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 AJAP1Q9UKB5 411 aaPredicted RBP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 LZTS1Q9Y250 596 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 STXBP5LQ9Y2K9 1186 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 SLC27A5Q9Y2P5 690 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 HCFC2Q9Y5Z7 792 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 PLXNA4Q9HCM2 1894 aa4.94□□□□□ -1.62
CHMP4A-202ENST00000524955 TRIOBPQ9H2D6 2365 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 WDR27A2RRH5 827 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 MYBPHLA2RUH7 354 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 A8MXQ7 604 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 CLDN5O00501 218 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 IKBKBO14920 756 aa4.93□□□□□ -1.62
CHMP4A-202ENST00000524955 SYN3O14994 580 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms