RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 LNPEPQ9UIQ6 1025 aa12.17□□□□□ -0.46
PTPRK-217ENST00000524534 C2CD2LO14523 706 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 CBX6O95503 412 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ICAM1P05362 532 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 CFHP08603 1231 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ZSCAN5DPP0CG00 497 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 CA4P22748 312 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 PTPN4P29074 926 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 EPHB2P29323 1055 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 GHRHRQ02643 423 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 MTMR1Q13613 665 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 NAIF1Q69YI7 327 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 PHF13Q86YI8 300 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 CCDC125Q86Z20 511 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 RCOR2Q8IZ40 523 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ASAP3Q8TDY4 903 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 CLEC4DQ8WXI8 215 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ZNF75CPQ92670 426 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 FAM84AQ96KN4 292 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 NUDCD1Q96RS6 583 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 FAM167BQ9BTA0 163 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 SAR1AQ9NR31 198 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 USP21Q9UK80 565 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 DRG1Q9Y295 367 aaKnown RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 A0A1W2PPM1 405 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 NFIBO00712 420 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 LINGO3P0C6S8 592 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ETS1P14921 441 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ACO1P21399 889 aaKnown RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 GARTP22102 1010 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 CETN2P41208 172 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 PTGER2P43116 358 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ARSEP51690 589 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 CLDN10P78369 228 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 SATB1Q01826 763 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 SLC27A3Q5K4L6 730 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 RNASEH2BQ5TBB1 312 aaKnown RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 HHATQ5VTY9 493 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ANO7Q6IWH7 933 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ZNF449Q6P9G9 518 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ABRAQ8N0Z2 381 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 SAMD3Q8N6K7 520 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 ZNF398Q8TD17 642 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 SLITRK1Q96PX8 696 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 OSBPL1AQ9BXW6 950 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 MAK16Q9BXY0 300 aaKnown RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 DENND2DQ9H6A0 471 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 VPS37BQ9H9H4 285 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 PSMC3IPQ9P2W1 217 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-217ENST00000524534 CCPG1Q9ULG6 757 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 USTQ9Y2C2 406 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 SCINQ9Y6U3 715 aa12.16□□□□□ -0.46
PTPRK-217ENST00000524534 TLR3O15455 904 aaKnown RBP12.15□□□□□ -0.46
PTPRK-217ENST00000524534 ZBED4O75132 1171 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 KRT10P13645 584 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 ATP6V1C1P21283 382 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 GJC1P36383 396 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 JAK3P52333 1124 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 GPS1Q13098 491 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 ZYXQ15942 572 aaKnown RBP12.15□□□□□ -0.46
PTPRK-217ENST00000524534 CTC1Q2NKJ3 1217 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 ATP13A4Q4VNC1 1196 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 TAF1BQ53T94 588 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-217ENST00000524534 EFHC2Q5JST6 749 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 ANO5Q75V66 913 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 NLRP9Q7RTR0 991 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 TRMT1LQ7Z2T5 733 aaKnown RBP12.15□□□□□ -0.46
PTPRK-217ENST00000524534 FEZF2Q8TBJ5 459 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 RBM41Q96IZ5 413 aaKnown RBP12.15□□□□□ -0.46
PTPRK-217ENST00000524534 C17orf75Q9HAS0 396 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 ZNF148Q9UQR1 794 aa12.15□□□□□ -0.46
PTPRK-217ENST00000524534 KIF3CO14782 793 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 HNRNPCL1O60812 293 aaKnown RBP12.15□□□□□ -0.47
PTPRK-217ENST00000524534 TJP3O95049 919 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 ZWINTO95229 277 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 CCNE2O96020 404 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 RXRBP28702 533 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 CAP2P40123 477 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 C1QBPQ07021 282 aaKnown RBP12.15□□□□□ -0.47
PTPRK-217ENST00000524534 ZACNQ401N2 412 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 PLEKHG4Q58EX7 1191 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.47
PTPRK-217ENST00000524534 ZC3H12AQ5D1E8 599 aaKnown RBP12.15□□□□□ -0.47
PTPRK-217ENST00000524534 WDR44Q5JSH3 913 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 HP1BP3Q5SSJ5 553 aaPredicted RBP12.15□□□□□ -0.47
PTPRK-217ENST00000524534 LVRNQ6Q4G3 990 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 MFSD7Q6UXD7 560 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 PASD1Q8IV76 773 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 ZBED8Q8IZ13 594 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 CFAP61Q8NHU2 1237 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 TTC8Q8TAM2 541 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 FBXO41Q8TF61 875 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 FAM213AQ9BRX8 229 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 KLHL11Q9NVR0 708 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.15□□□□□ -0.47
PTPRK-217ENST00000524534 FETUBQ9UGM5 382 aa12.15□□□□□ -0.47
PTPRK-217ENST00000524534 ZFP69BQ9UJL9 534 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms