RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 UTP14CQ5TAP6 766 aaKnown RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 FNDC7Q5VTL7 733 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 AGAP9Q5VTM2 703 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 METRNLQ641Q3 311 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 ZNF276Q8N554 614 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 NUP133Q8WUM0 1156 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 KBTBD7Q8WVZ9 684 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 APIPQ96GX9 242 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 LRRC27Q9C0I9 530 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 REXO4Q9GZR2 422 aaKnown RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 BTBD1Q9H0C5 482 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 NUP62CLQ9H1M0 184 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 RSAD1Q9HA92 442 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 GPR35Q9HC97 309 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 SLAMF7Q9NQ25 335 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 USP25Q9UHP3 1055 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 EIF2B4Q9UI10 523 aaKnown RBP4.77□□□□□ -1.65
PCM1-220ENST00000523896 TPCN1Q9ULQ1 816 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 SLC45A2Q9UMX9 530 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 PCDHA6Q9UN73 950 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 PCDHGB6Q9Y5F9 930 aa4.77□□□□□ -1.65
PCM1-220ENST00000523896 XDHP47989 1333 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 GRXCR1A8MXD5 290 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 TRIM24O15164 1050 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 AGFG2O95081 481 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 CHEK2O96017 543 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 KITP10721 976 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 MYF5P13349 255 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 RPL17P18621 184 aaKnown RBP4.76□□□□□ -1.65
PCM1-220ENST00000523896 HDCP19113 662 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 EN2P19622 333 aaPredicted RBP4.76□□□□□ -1.65
PCM1-220ENST00000523896 SLC7A1P30825 629 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 APOBEC3AP31941 199 aaPredicted RBP4.76□□□□□ -1.65
PCM1-220ENST00000523896 ARFIP2P53365 341 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 NOMO3P69849 1222 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 NHLH2Q02577 135 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 SLFN5Q08AF3 891 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 PICALMQ13492 652 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 FAM102AQ5T9C2 384 aaPredicted RBP4.76□□□□□ -1.65
PCM1-220ENST00000523896 RHOT2Q8IXI1 618 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 TBC1D15Q8TC07 691 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 CPT1CQ8TCG5 803 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 LARP4BQ92615 738 aaKnown RBP4.76□□□□□ -1.65
PCM1-220ENST00000523896 DDX17Q92841 729 aaKnown RBP4.76□□□□□ -1.65
PCM1-220ENST00000523896 SCAMP4Q969E2 229 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 SUCLG2Q96I99 432 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 DCLRE1CQ96SD1 692 aaKnown RBP4.76□□□□□ -1.65
PCM1-220ENST00000523896 NEU1Q99519 415 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 TRIM54Q9BYV2 358 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 DPH1Q9BZG8 443 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 IKZF4Q9H2S9 585 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 SORCS3Q9UPU3 1222 aa4.76□□□□□ -1.65
PCM1-220ENST00000523896 USP19O94966 1318 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 ZNF785A8K8V0 405 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 LEFTY2O00292 366 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 TBX3O15119 743 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 PQBP1O60828 265 aaKnown RBP4.75□□□□□ -1.65
PCM1-220ENST00000523896 PRSS23O95084 383 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 SCAF4O95104 1147 aaKnown RBP4.75□□□□□ -1.65
PCM1-220ENST00000523896 GNAI2P04899 355 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 CKBP12277 381 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 FCER1AP12319 257 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 PSMC1P62191 440 aaKnown RBP4.75□□□□□ -1.65
PCM1-220ENST00000523896 TCF15Q12870 199 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 HABP2Q14520 560 aaPredicted RBP4.75□□□□□ -1.65
PCM1-220ENST00000523896 PTPAQ15257 358 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 NOMO2Q5JPE7 1267 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 LY6G5CQ5SRR4 150 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 IL31Q6EBC2 164 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 KCNV1Q6PIU1 500 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 TMIEQ8NEW7 156 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 KLHL32Q96NJ5 620 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 TTPALQ9BTX7 342 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 SIK2Q9H0K1 926 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 CHST12Q9NRB3 414 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.75□□□□□ -1.65
PCM1-220ENST00000523896 CHST2Q9Y4C5 530 aa4.75□□□□□ -1.65
PCM1-220ENST00000523896 E9PLN8 166 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 FOXN3O00409 490 aaPredicted RBP4.74□□□□□ -1.65
PCM1-220ENST00000523896 ABHD16AO95870 558 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 PHKA1P46020 1223 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 KCNJ5P48544 419 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 NEK3P51956 506 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 ZNF135P52742 658 aaPredicted RBP4.74□□□□□ -1.65
PCM1-220ENST00000523896 SLC25A3Q00325 362 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 TIGD2Q4W5G0 525 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 SYCP2LQ5T4T6 812 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 LDLRAD3Q86YD5 345 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 ULK2Q8IYT8 1036 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 OR56A1Q8NGH5 318 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 PHKBQ93100 1093 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 ZG16BQ96DA0 208 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 SLC39A13Q96H72 371 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 PHACTR3Q96KR7 559 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 P2RX7Q99572 595 aaKnown RBP4.74□□□□□ -1.65
PCM1-220ENST00000523896 VKORC1Q9BQB6 163 aa4.74□□□□□ -1.65
PCM1-220ENST00000523896 NAA15Q9BXJ9 866 aaKnown RBP4.74□□□□□ -1.65
PCM1-220ENST00000523896 TINAGL1Q9GZM7 467 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms