RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 CYLC1P35663 651 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 PSMC1P62191 440 aaKnown RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 BTG3Q14201 252 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 ZBTB6Q15916 424 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 DPY19L2P1Q6NXN4 242 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 PHLDB2Q86SQ0 1253 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 JAKMIP2Q96AA8 810 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 B3GALT6Q96L58 329 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 MRPL45Q9BRJ2 306 aaKnown RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 NAA15Q9BXJ9 866 aaKnown RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 CXXC1Q9P0U4 656 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 MTUS1Q9ULD2 1270 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 DERAQ9Y315 318 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 NDST1P52848 882 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 EPHB4P54760 987 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 SV2CQ496J9 727 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 C2CD6Q53TS8 623 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 DNTTIP2Q5QJE6 756 aaKnown RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 WSCD1Q658N2 575 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 ZNF571Q7Z3V5 609 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-212ENST00000523483 ACOT1Q86TX2 421 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 ZSCAN30Q86W11 494 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 NPAS4Q8IUM7 802 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 SHC3Q92529 594 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 EDEM3Q9BZQ6 932 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 GPR88Q9GZN0 384 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 SDCBP2Q9H190 292 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 SNX25Q9H3E2 840 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 SCN1AP35498 2009 aa9.99□□□□□ -0.81
SDCBP-212ENST00000523483 USP27XA6NNY8 438 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 KIF4AO95239 1232 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 NDUFA10O95299 355 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 RFX1P22670 979 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 JAM2P57087 298 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 TMEM139Q8IV31 216 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 C12orf29Q8N999 325 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 SENP8Q96LD8 212 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 LPIN3Q9BQK8 851 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.98□□□□□ -0.81
SDCBP-212ENST00000523483 TRAIPQ9BWF2 469 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 A0A087X0T9 212 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 A0A0U1RQJ8 604 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 C2CD2LO14523 706 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 PMM2O15305 246 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 MMEP08473 750 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 FAM228BP0C875 321 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ATICP31939 592 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 CLCN1P35523 988 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ALDH7A1P49419 539 aaKnown RBP9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ARPP19P56211 112 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 WDR5P61964 334 aaKnown RBP9.98□□□□□ -0.81
SDCBP-212ENST00000523483 PPIGQ13427 754 aaKnown RBP eCLIP9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ENOSF1Q7L5Y1 443 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 IRF2BP2Q7Z5L9 587 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 NOP9Q86U38 636 aaKnown RBP9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ADGRF2Q8IZF7 708 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ATRIPQ8WXE1 791 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 TWNKQ96RR1 684 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 IL23AQ9NPF7 189 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 CHORDC1Q9UHD1 332 aaPredicted RBP9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ABHD14A-ACY1A0A1B0GW23 586 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ESPNB1AK53 854 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 CYP11B1P15538 503 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 POU5F1Q01860 360 aaKnown RBP9.98□□□□□ -0.81
SDCBP-212ENST00000523483 ENPEPQ07075 957 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 CCDC142Q17RM4 750 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 TIGD5Q53EQ6 642 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 CCDC122Q5T0U0 273 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 HGSNATQ68CP4 663 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 UBE2Q1Q7Z7E8 422 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 PALB2Q86YC2 1186 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 LRRC52Q8N7C0 313 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 SLC30A5Q8TAD4 765 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 C16orf45Q96MC5 204 aaPredicted RBP9.98□□□□□ -0.81
SDCBP-212ENST00000523483 L1RE1Q9UN81 338 aa9.98□□□□□ -0.81
SDCBP-212ENST00000523483 PIK3R2O00459 728 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 PIRO00625 290 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 ALDH2P05091 517 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 CCDC175P0C221 793 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 LMO2P25791 158 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 PNPLA4P41247 253 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 UPP1Q16831 310 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 SOWAHAQ2M3V2 549 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 ARHGAP29Q52LW3 1261 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 XKR4Q5GH76 650 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 FAM71AQ8IYT1 594 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 CXorf38Q8TB03 319 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 ZNF592Q92610 1267 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 NRDE2Q9H7Z3 1164 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 ST7Q9NRC1 585 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 AIPL1Q9NZN9 384 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 KANSL3Q9P2N6 904 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 FBXL5Q9UKA1 691 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 FAN1Q9Y2M0 1017 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 HOXA2O43364 376 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 RFC2P35250 354 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 GNL1P36915 607 aaPredicted RBP9.97□□□□□ -0.81
SDCBP-212ENST00000523483 YWHAEP62258 255 aaKnown RBP9.97□□□□□ -0.81
SDCBP-212ENST00000523483 FAM189BP81408 668 aa9.97□□□□□ -0.81
SDCBP-212ENST00000523483 C16orf59Q7L2K0 433 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms