RNA–Protein interactions for RNA: ENST00000523139.5

BRD9-219, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-219ENST00000523139 SMARCB1Q12824 385 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 MRPL58Q14197 206 aaKnown RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 STILQ15468 1287 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 WDR72Q3MJ13 1102 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 GLRA4Q5JXX5 417 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 LMBRD2Q68DH5 695 aaPredicted RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 IQCEQ6IPM2 695 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 PPP1R2P3Q6NXS1 205 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 OTOP2Q7RTS6 562 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 CACNA2D4Q7Z3S7 1137 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 IRF2BP2Q7Z5L9 587 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 ZNF280BQ86YH2 543 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 CRYBG2Q8N1P7 616 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 APPL2Q8NEU8 664 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 C18orf25Q96B23 403 aaPredicted RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 CEP295NLQ96MC4 621 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 KREMEN1Q96MU8 473 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 FAM193BQ96PV7 902 aaPredicted RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 CRACR2AQ9BSW2 395 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 LSM14BQ9BX40 385 aaKnown RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 GPR88Q9GZN0 384 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 CXCL16Q9H2A7 254 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 APOBEC3GQ9HC16 384 aaKnown RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 UBE2TQ9NPD8 197 aaPredicted RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 CHST7Q9NS84 486 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 FAM207AQ9NSI2 230 aaPredicted RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 ABHD10Q9NUJ1 306 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 HSFX1Q9UBD0 423 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 DNAJC12Q9UKB3 198 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 ADAM28Q9UKQ2 775 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 MAFFQ9ULX9 164 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 BARX2Q9UMQ3 279 aaPredicted RBP6.76□□□□□ -1.33
BRD9-219ENST00000523139 PCDHB8Q9UN66 801 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 FAN1Q9Y2M0 1017 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 PCDHA11Q9Y5I1 949 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 IRAK3Q9Y616 596 aa6.76□□□□□ -1.33
BRD9-219ENST00000523139 SF3B1O75533 1304 aaKnown RBP eCLIP6.76□□□□□ -1.333e-6■■■■■ 137.9
BRD9-219ENST00000523139 NLRC5Q86WI3 1866 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 MKI67P46013 3256 aaKnown RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 TBKBP1A7MCY6 615 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 EPHB6O15197 1021 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 SPTLC1O15269 473 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 NRDCO43847 1150 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 HUS1O60921 280 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 B3GAT3O94766 335 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 LCA5LO95447 670 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 KRT19P08727 400 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 ODC1P11926 461 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 FGFR3P22607 806 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 KRT9P35527 623 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 SOX5P35711 763 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 BCAR1P56945 870 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 POLR2FP61218 127 aaKnown RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 TNNC1P63316 161 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 CREMQ03060 361 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 BTG3Q14201 252 aaPredicted RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 BMS1Q14692 1282 aaKnown RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 DRAP1Q14919 205 aaPredicted RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 SOWAHAQ2M3V2 549 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 TSR1Q2NL82 804 aaKnown RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 SFMBT2Q5VUG0 894 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 HGSNATQ68CP4 663 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 KCNT2Q6UVM3 1135 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 RTL10Q7L3V2 364 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 TMC6Q7Z403 805 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 DDX53Q86TM3 631 aaKnown RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 TMTC1Q8IUR5 882 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 ARHGEF19Q8IW93 802 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 LRRC8AQ8IWT6 810 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 CCDC170Q8IYT3 715 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 SLC39A11Q8N1S5 342 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 PPM1KQ8N3J5 372 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 FIBCD1Q8N539 461 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 RNF169Q8NCN4 708 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 C3orf58Q8NDZ4 430 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 TATDN2Q93075 761 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 IGSF21Q96ID5 467 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 TNIP3Q96KP6 325 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 SENP8Q96LD8 212 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 ZNF558Q96NG5 402 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 SPAG5Q96R06 1193 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 YME1L1Q96TA2 773 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 ACBD6Q9BR61 282 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 SYT11Q9BT88 431 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 ZNF518BQ9C0D4 1074 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 CISHQ9NSE2 258 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 ZNHIT6Q9NWK9 470 aaKnown RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 MARCH5Q9NX47 278 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 CXXC1Q9P0U4 656 aaPredicted RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 ZMYND8Q9ULU4 1186 aaPredicted RBP6.75□□□□□ -1.33
BRD9-219ENST00000523139 PCDHGC3Q9UN70 934 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 SSX2IPQ9Y2D8 614 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 STXBP5LQ9Y2K9 1186 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
BRD9-219ENST00000523139 TMEM265A0A087WTH1 108 aa6.74□□□□□ -1.33
BRD9-219ENST00000523139 LRRC53A6NM62 1247 aa6.74□□□□□ -1.33
BRD9-219ENST00000523139 RBAK-RBAKDNI3L0D1 243 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms