RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 MRE11P49959 708 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 EPHA5P54756 1037 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 TWF1Q12792 350 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 MYBPC2Q14324 1141 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 MTSS1LQ765P7 747 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 USP37Q86T82 979 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 SYCP3Q8IZU3 236 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 SAAL1Q96ER3 474 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 PGLYRP2Q96PD5 576 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 TMEM209Q96SK2 561 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 KXD1Q9BQD3 176 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 RTP3Q9BQQ7 232 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 CBWD1Q9BRT8 395 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 PLA2G2FQ9BZM2 168 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 CUEDC2Q9H467 287 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 GDE1Q9NZC3 331 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 PCDHA7Q9UN72 937 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 OBSL1O75147 1896 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 NUP210Q8TEM1 1887 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-223ENST00000523125 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 H0Y858 1186 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 MOSPD3O75425 235 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 MICAL2O94851 1124 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 ODC1P11926 461 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 DUSP4Q13115 394 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 CENPPQ6IPU0 288 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 EPM2AIP1Q7L775 607 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-223ENST00000523125 NT5DC4Q86YG4 428 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 BRSK2Q8IWQ3 736 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 TTC9BQ8N6N2 239 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 IQUBQ8NA54 791 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 OR10T2Q8NGX3 314 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 CXorf38Q8TB03 319 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 FAM84AQ96KN4 292 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 C7orf25Q9BPX7 421 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 LRRC3Q9BY71 257 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 DNAJC25Q9H1X3 360 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 PATJQ8NI35 1801 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 FRYLO94915 3013 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 CFAP54Q96N23 3096 aa13.38□□□□□ -0.27
VEGFA-223ENST00000523125 FANCMQ8IYD8 2048 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 MTMR11A4FU01 709 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 CYB561D2O14569 222 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ZNF197O14709 1029 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
VEGFA-223ENST00000523125 EXTL3O43909 919 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ECI2O75521 394 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 LDHAP00338 332 aaKnown RBP13.37□□□□□ -0.27
VEGFA-223ENST00000523125 FCARP24071 287 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 CASP1P29466 404 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ME1P48163 572 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 TAF6P49848 677 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
VEGFA-223ENST00000523125 EHHADHQ08426 723 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 RESP18Q5W5W9 173 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 TANGO2Q6ICL3 276 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 PHLDB3Q6NSJ2 640 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 CCDC105Q8IYK2 499 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 C1orf127Q8N9H9 656 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ATAD1Q8NBU5 361 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ZNF512Q96ME7 567 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ZSWIM3Q96MP5 696 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 PYM1Q9BRP8 204 aaKnown RBP13.37□□□□□ -0.27
VEGFA-223ENST00000523125 LRRC27Q9C0I9 530 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 TMEM206Q9H813 350 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 TBC1D17Q9HA65 648 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ARHGEF3Q9NR81 526 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 RBAKQ9NYW8 714 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-223ENST00000523125 RCOR1Q9UKL0 485 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 SLC27A5Q9Y2P5 690 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 ZNF638Q14966 1978 aaKnown RBP13.37□□□□□ -0.27
VEGFA-223ENST00000523125 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
VEGFA-223ENST00000523125 CACNA1IQ9P0X4 2223 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 KIF26AQ9ULI4 1882 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-223ENST00000523125 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 GJA1P17302 382 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 STARD6P59095 220 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 ASIC1P78348 528 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 TFAMQ00059 246 aaKnown RBP13.36□□□□□ -0.27
VEGFA-223ENST00000523125 AMPD3Q01432 767 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 FAM78AQ5JUQ0 283 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 IQCEQ6IPM2 695 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-223ENST00000523125 LRRTM3Q86VH5 581 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 TMC8Q8IU68 726 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 ELMOD1Q8N336 334 aa13.36□□□□□ -0.27
VEGFA-223ENST00000523125 DTWD2Q8NBA8 298 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms