RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LMAN1LQ9HAT1 526 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 ODF2LQ9ULJ1 636 aa16.75■□□□□ 0.27
MRPS28-209ENST00000522987 MRPS17Q9Y2R5 130 aaKnown RBP16.75■□□□□ 0.27
MRPS28-209ENST00000522987 MTMR11A4FU01 709 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 SLC38A8A6NNN8 435 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 H0YCG3 227 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 TRAK2O60296 914 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 OAZ2O95190 189 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 EPHB3P54753 998 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 FOXK2Q01167 660 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 ZNF528Q3MIS6 628 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 LARP1BQ659C4 914 aaKnown RBP16.74■□□□□ 0.27
MRPS28-209ENST00000522987 ERMP1Q7Z2K6 904 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 DGLUCYQ7Z3D6 616 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 MAP4K3Q8IVH8 894 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 YAF2Q8IY57 180 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 BEST2Q8NFU1 509 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 IRF7Q92985 503 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 ZFYVE19Q96K21 471 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 LPIN3Q9BQK8 851 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 LRRC3Q9BY71 257 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 PARVGQ9HBI0 331 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
MRPS28-209ENST00000522987 ZSCAN32Q9NX65 697 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 KCND2Q9NZV8 630 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
MRPS28-209ENST00000522987 KCNG1Q9UIX4 513 aa16.74■□□□□ 0.27
MRPS28-209ENST00000522987 SMG5Q9UPR3 1016 aaKnown RBP16.74■□□□□ 0.27
MRPS28-209ENST00000522987 A0A0B4J269 797 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 XPOTO43592 962 aaKnown RBP16.73■□□□□ 0.27
MRPS28-209ENST00000522987 TBCAO75347 108 aaKnown RBP16.73■□□□□ 0.27
MRPS28-209ENST00000522987 CYP3A5P20815 502 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 MAGEA9P43362 315 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 ALDH1A3P47895 512 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 AARSP49588 968 aaKnown RBP eCLIP16.73■□□□□ 0.27
MRPS28-209ENST00000522987 EPHA5P54756 1037 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 LILRA4P59901 499 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 CYP4F8P98187 520 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 TMEM132DQ14C87 1099 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 SF3A1Q15459 793 aaKnown RBP16.73■□□□□ 0.27
MRPS28-209ENST00000522987 RSPO4Q2I0M5 234 aaPredicted RBP16.73■□□□□ 0.27
MRPS28-209ENST00000522987 SPATA1Q5VX52 437 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 C9orf57Q5W0N0 161 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 CENPPQ6IPU0 288 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 USP49Q70CQ1 688 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 OR10T2Q8NGX3 314 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 RAD54LQ92698 747 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 SEPT5Q99719 369 aaPredicted RBP16.73■□□□□ 0.27
MRPS28-209ENST00000522987 CPSF3Q9UKF6 684 aaKnown RBP16.73■□□□□ 0.27
MRPS28-209ENST00000522987 PCDHGA2Q9Y5H1 932 aa16.73■□□□□ 0.27
MRPS28-209ENST00000522987 VPS37CA5D8V6 355 aaPredicted RBP16.72■□□□□ 0.27
MRPS28-209ENST00000522987 OR6C75A6NL08 312 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 MAN2B1O00754 1011 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 MICAL2O94851 1124 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 ODC1P11926 461 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 GABRR2P28476 465 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 HOXC13P31276 330 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 RPS9P46781 194 aaKnown RBP16.72■□□□□ 0.27
MRPS28-209ENST00000522987 GPR17Q13304 367 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 SLC39A12Q504Y0 691 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 GPR158Q5T848 1215 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 GAREM2Q75VX8 874 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 DYMQ7RTS9 669 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 MFSD6LQ8IWD5 586 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 ZNF687Q8N1G0 1237 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 ZBTB44Q8NCP5 570 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 STKLD1Q8NE28 680 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 CSGALNACT1Q8TDX6 532 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 GIPC2Q8TF65 315 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 DEPDC1BQ8WUY9 529 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 FAM84AQ96KN4 292 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 AK8Q96MA6 479 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 FIZ1Q96SL8 496 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 SMG9Q9H0W8 520 aaKnown RBP16.72■□□□□ 0.27
MRPS28-209ENST00000522987 ATXN3LQ9H3M9 355 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 PRMT8Q9NR22 394 aaPredicted RBP16.72■□□□□ 0.27
MRPS28-209ENST00000522987 TBC1D7Q9P0N9 293 aa16.72■□□□□ 0.27
MRPS28-209ENST00000522987 PIGRP01833 764 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 KPNA1P52294 538 aaPredicted RBP16.71■□□□□ 0.27
MRPS28-209ENST00000522987 ZNF131P52739 623 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 SATB1Q01826 763 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 DMWDQ09019 674 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 PLD1Q13393 1074 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 MGAT5BQ3V5L5 792 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 ADALQ6DHV7 355 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 DNAJB7Q7Z6W7 309 aaPredicted RBP16.71■□□□□ 0.27
MRPS28-209ENST00000522987 SFR1Q86XK3 245 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 ARID3BQ8IVW6 561 aaPredicted RBP16.71■□□□□ 0.27
MRPS28-209ENST00000522987 LEMD2Q8NC56 503 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 LARP4BQ92615 738 aaKnown RBP16.71■□□□□ 0.27
MRPS28-209ENST00000522987 EPSTI1Q96J88 318 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 LRRC3BQ96PB8 259 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 PYM1Q9BRP8 204 aaKnown RBP16.71■□□□□ 0.27
MRPS28-209ENST00000522987 CHRDQ9H2X0 955 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 USP18Q9UMW8 372 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 SDK1Q7Z5N4 2213 aa16.71■□□□□ 0.27
MRPS28-209ENST00000522987 DPYSL4O14531 572 aa16.7■□□□□ 0.26
MRPS28-209ENST00000522987 PRAMEF12O95522 483 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms