RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ZDHHC7Q9NXF8 308 aa19.26■□□□□ 0.67
CLK4-211ENST00000522556 CLUHO75153 1309 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 KPNA7A9QM74 516 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 PDXKO00764 312 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 NRG2O14511 850 aaPredicted RBP19.25■□□□□ 0.67
CLK4-211ENST00000522556 C1RP00736 705 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 CYP11A1P05108 521 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 DLG4P78352 724 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 ZCWPW2Q504Y3 356 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 GRASPQ7Z6J2 395 aaPredicted RBP19.25■□□□□ 0.67
CLK4-211ENST00000522556 USP37Q86T82 979 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 OSTM1Q86WC4 334 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 GUF1Q8N442 669 aaKnown RBP19.25■□□□□ 0.67
CLK4-211ENST00000522556 ST13P5Q8NFI4 369 aaPredicted RBP19.25■□□□□ 0.67
CLK4-211ENST00000522556 SPATA20Q8TB22 786 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 CCDC47Q96A33 483 aaKnown RBP19.25■□□□□ 0.67
CLK4-211ENST00000522556 EEF2KMTQ96G04 330 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 ANKRD36BP1Q96IX9 119 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 ZNF560Q96MR9 790 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 TIGD1Q96MW7 591 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 SMOC2Q9H3U7 446 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 CGNQ9P2M7 1197 aaKnown RBP19.25■□□□□ 0.67
CLK4-211ENST00000522556 ITGA11Q9UKX5 1188 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 L1RE1Q9UN81 338 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 POLIQ9UNA4 740 aa19.25■□□□□ 0.67
CLK4-211ENST00000522556 FAM86C2PA6NEL3 165 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 LRRIQ3A6PVS8 624 aaPredicted RBP19.24■□□□□ 0.67
CLK4-211ENST00000522556 ATF2P15336 505 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 PRCPP42785 496 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 PMS1P54277 932 aaKnown RBP19.24■□□□□ 0.67
CLK4-211ENST00000522556 ADCY1Q08828 1119 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 SV2CQ496J9 727 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 CEP135Q66GS9 1140 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 CCDC149Q6ZUS6 474 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 TRAPPC11Q7Z392 1133 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 SLC9A9Q8IVB4 645 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 PDCL2Q8N4E4 241 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 CACTINQ8WUQ7 758 aaKnown RBP19.24■□□□□ 0.67
CLK4-211ENST00000522556 MYADMQ96S97 322 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 PIDD1Q9HB75 910 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 CYP4F11Q9HBI6 524 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 WDR6Q9NNW5 1121 aaKnown RBP19.24■□□□□ 0.67
CLK4-211ENST00000522556 C11orf16Q9NQ32 467 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 MAN1B1Q9UKM7 699 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 TRAF3IP3Q9Y228 551 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 MYO10Q9HD67 2058 aa19.24■□□□□ 0.67
CLK4-211ENST00000522556 CST3P01034 146 aaPredicted RBP19.23■□□□□ 0.67
CLK4-211ENST00000522556 TNNC2P02585 160 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 ASGR2P07307 311 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 TNNI1P19237 187 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 RBP5P82980 135 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 SURF1Q15526 300 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 C1orf220Q5T0J3 134 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 GET4Q7L5D6 327 aaPredicted RBP19.23■□□□□ 0.67
CLK4-211ENST00000522556 LRRTM3Q86VH5 581 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 LRRC52Q8N7C0 313 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 TDRD5Q8NAT2 981 aaKnown RBP19.23■□□□□ 0.67
CLK4-211ENST00000522556 GOLGA5Q8TBA6 731 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 PARD3BQ8TEW8 1205 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 SMARCE1Q969G3 411 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 FNBP1Q96RU3 617 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 DNMT3BQ9UBC3 853 aaKnown RBP19.23■□□□□ 0.67
CLK4-211ENST00000522556 DPP7Q9UHL4 492 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 INSL5Q9Y5Q6 135 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 SNX9Q9Y5X1 595 aa19.23■□□□□ 0.67
CLK4-211ENST00000522556 MTMR11A4FU01 709 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 PRRG1O14668 218 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 KINO60870 393 aaKnown RBP19.22■□□□□ 0.67
CLK4-211ENST00000522556 PRPF40AO75400 957 aaKnown RBP19.22■□□□□ 0.67
CLK4-211ENST00000522556 SOAT2O75908 522 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 AKAP3O75969 853 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 CD44P16070 742 aaKnown RBP19.22■□□□□ 0.67
CLK4-211ENST00000522556 BMP6P22004 513 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 NR2F2P24468 414 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 HOXA9P31269 272 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 DUOXA2Q1HG44 320 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 TDRD10Q5VZ19 366 aaKnown RBP19.22■□□□□ 0.67
CLK4-211ENST00000522556 ELMSAN1Q6PJG2 1045 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 POTEHQ6S545 545 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 ATAD1Q8NBU5 361 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 RHOBTB2Q9BYZ6 727 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 TMLHEQ9NVH6 421 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 AFF4Q9UHB7 1163 aaKnown RBP19.22■□□□□ 0.67
CLK4-211ENST00000522556 NME7Q9Y5B8 376 aa19.22■□□□□ 0.67
CLK4-211ENST00000522556 ARHGEF37A1IGU5 675 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 TRIM49BA6NDI0 452 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 OR6C75A6NL08 312 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 PI4K2BG5E9Z4 385 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 BIN1O00499 593 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 DCXO43602 365 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 CALUO43852 315 aaPredicted RBP19.21■□□□□ 0.67
CLK4-211ENST00000522556 HNRNPA1P09651 372 aaKnown RBP eCLIP19.21■□□□□ 0.67
CLK4-211ENST00000522556 ACAT1P24752 427 aaKnown RBP19.21■□□□□ 0.67
CLK4-211ENST00000522556 PNPLA4P41247 253 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 SOWAHAQ2M3V2 549 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 ZNF658Q5TYW1 1059 aaPredicted RBP19.21■□□□□ 0.67
CLK4-211ENST00000522556 TPGS2Q68CL5 300 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 TCEAL8Q8IYN2 117 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 ITFG1Q8TB96 612 aa19.21■□□□□ 0.67
CLK4-211ENST00000522556 TMEM174Q8WUU8 243 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms