RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CAMTA1Q9Y6Y1 1673 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 EIF4E1BA6NMX2 242 aaKnown RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 LRRC23Q53EV4 343 aaPredicted RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 KIAA1841Q6NSI8 718 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 C11orf63Q6NUN7 778 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 RFX8Q6ZV50 586 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 LCA5Q86VQ0 697 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 RIBC1Q8N443 379 aaPredicted RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 TTC8Q8TAM2 541 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 CXorf38Q8TB03 319 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 EPS8L3Q8TE67 593 aaKnown RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 SLC4A9Q96Q91 983 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 FAM118BQ9BPY3 351 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 ZC3H7BQ9UGR2 993 aaKnown RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 FANCGO15287 622 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 SESN2P58004 480 aaPredicted RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 APOBEC3FQ8IUX4 373 aaKnown RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 CCDC124Q96CT7 223 aaKnown RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 ARHGEF26Q96DR7 871 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 MAGEB5Q9BZ81 275 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 RSPH10B2B2RC85 870 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 AKAP3O75969 853 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 RSPH10BP0C881 870 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 KDSRQ06136 332 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 KYAT1Q16773 422 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 EPC2Q52LR7 807 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 GIPC2Q8TF65 315 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 FAM151AQ8WW52 585 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 GANQ9H2C0 597 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 SLC24A3Q9HC58 644 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 ANKEF1Q9NU02 776 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 IGF2BP3O00425 579 aaKnown RBP eCLIP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 PYGBP11216 843 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 ITGA4P13612 1032 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 MXD4Q14582 209 aaPredicted RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 SMAD1Q15797 465 aaKnown RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 TEDDM1Q5T9Z0 273 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 C3orf62Q6ZUJ4 267 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 NT5DC3Q86UY8 548 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 GJD4Q96KN9 370 aaPredicted RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 NUDT12Q9BQG2 462 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 XAB2Q9HCS7 855 aaKnown RBP14.51□□□□□ -0.09
SYNPO-205ENST00000522122 AGAP1Q9UPQ3 857 aa14.51□□□□□ -0.09
SYNPO-205ENST00000522122 NQO1P15559 274 aaKnown RBP14.5□□□□□ -0.09
SYNPO-205ENST00000522122 SERPINB4P48594 390 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 CASP4P49662 377 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 NME3Q13232 169 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 THEM5Q8N1Q8 247 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 KRT82Q9NSB4 513 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 ADA2Q9NZK5 511 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 O00370 1275 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 GNAT1P11488 350 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 RARGP13631 454 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 PPARGP37231 505 aaPredicted RBP14.5□□□□□ -0.09
SYNPO-205ENST00000522122 ZNF200P98182 395 aaPredicted RBP14.5□□□□□ -0.09
SYNPO-205ENST00000522122 HIC1Q14526 733 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 STILQ15468 1287 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 ABTB1Q969K4 478 aaPredicted RBP14.5□□□□□ -0.09
SYNPO-205ENST00000522122 OSGEPQ9NPF4 335 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 WHRNQ9P202 907 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 LRFN2Q9ULH4 789 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 MAFGO15525 162 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 ATP6V1G2O95670 118 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 RBP3P10745 1247 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 MUTP22033 750 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 KCNV1Q6PIU1 500 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 KCNK18Q7Z418 384 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 RASSF3Q86WH2 238 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 SEPT1Q8WYJ6 367 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 CENPTQ96BT3 561 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 ACAP3Q96P50 834 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 PI4K2AQ9BTU6 479 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 MOV10L1Q9BXT6 1211 aaKnown RBP14.5□□□□□ -0.09
SYNPO-205ENST00000522122 TRPV6Q9H1D0 765 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 XPO7Q9UIA9 1087 aaKnown RBP14.5□□□□□ -0.09
SYNPO-205ENST00000522122 AGPSO00116 658 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 SMAPO00193 183 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 PPP1R12AO14974 1030 aaPredicted RBP14.5□□□□□ -0.09
SYNPO-205ENST00000522122 ZNF263O14978 683 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 CST8O60676 142 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 RALAP11233 206 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 PRKCIP41743 596 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 EMC2Q15006 297 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 SYCP2LQ5T4T6 812 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 TXNRD3Q86VQ6 643 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 L3MBTL1Q9Y468 752 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 IGSF9BQ9UPX0 1349 aa14.5□□□□□ -0.09
SYNPO-205ENST00000522122 POLRMTO00411 1230 aaKnown RBP14.49□□□□□ -0.09
SYNPO-205ENST00000522122 NPY5RQ15761 445 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 SCN4BQ8IWT1 228 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 FEZF2Q8TBJ5 459 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 PRPF31Q8WWY3 499 aaKnown RBP14.49□□□□□ -0.09
SYNPO-205ENST00000522122 RNF103-CHMP3A0A140T963 221 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 ENO1P06733 434 aaKnown RBP14.49□□□□□ -0.09
SYNPO-205ENST00000522122 CHRNA5P30532 468 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 PRKCEQ02156 737 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 STX3Q13277 289 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 ACAD10Q6JQN1 1059 aa14.49□□□□□ -0.09
SYNPO-205ENST00000522122 LONP2Q86WA8 852 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms