RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 WHAMMQ8TF30 809 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 LENG9Q96B70 501 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 EBF3Q9H4W6 596 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 PARP2Q9UGN5 583 aa8.41□□□□□ -1.06
HMBOX1-208ENST00000521516 AP5Z1O43299 807 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 ALDH1A2O94788 518 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 ZNF883P0CG24 379 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 ARF4P18085 180 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 U2AF2P26368 475 aaKnown RBP eCLIP8.4□□□□□ -1.063e-6■■■■□ 21.7
HMBOX1-208ENST00000521516 GJA4P35212 333 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 PTENP60484 403 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 NCBP1Q09161 790 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 PREPLQ4J6C6 727 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 C2orf27AQ580R0 203 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 WWC2Q6AWC2 1192 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 ANO5Q75V66 913 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 ZNF654Q8IZM8 581 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 CMTR1Q8N1G2 835 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 RNF149Q8NC42 400 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 IGDCC4Q8TDY8 1250 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 ARID3AQ99856 593 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 ZDHHC5Q9C0B5 715 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 DNAJC25Q9H1X3 360 aa8.4□□□□□ -1.06
HMBOX1-208ENST00000521516 ITPR2Q14571 2701 aa8.4□□□□□ -1.07
HMBOX1-208ENST00000521516 ASAP2O43150 1006 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 TRAPPC3O43617 180 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 B3GAT3O94766 335 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 ADCY7P51828 1080 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 SCRN1Q12765 414 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 RTP5Q14D33 572 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 C4orf17Q53FE4 359 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 GPR158Q5T848 1215 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 TRIM68Q6AZZ1 485 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 SLC27A1Q6PCB7 646 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 TMEM92Q6UXU6 159 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 PRICKLE2Q7Z3G6 844 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 TMPRSS12Q86WS5 348 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 SPACA3Q8IXA5 215 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 CD101Q93033 1021 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 RIT2Q99578 217 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 DHX33Q9H6R0 707 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 FBXL5Q9UKA1 691 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 YIPF1Q9Y548 306 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 A0A1B0GUA9 196 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 NPTXRO95502 500 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 ARSAP15289 507 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 CIITAP33076 1130 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 ARPP19P56211 112 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 SEMG2Q02383 582 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 ZNF33AQ06730 810 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 SART3Q15020 963 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 PTPRNQ16849 979 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 FERMT3Q86UX7 667 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 BEST2Q8NFU1 509 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 SETD7Q8WTS6 366 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 TMEM143Q96AN5 459 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 TRIM4Q9C037 500 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 CXCL16Q9H2A7 254 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 UNC45AQ9H3U1 944 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 TASP1Q9H6P5 420 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 PPME1Q9Y570 386 aa8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 UTP20O75691 2785 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-208ENST00000521516 NID2Q14112 1375 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 H7C4K7 107 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 I3L4J1 428 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 FGF19O95750 216 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 CHRM1P11229 460 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 CR2P20023 1033 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 MBTD1Q05BQ5 628 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 POU5F1BQ06416 359 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 TRDNQ13061 729 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 PLD1Q13393 1074 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 UBAP2LQ14157 1087 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 UPP1Q16831 310 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 PRR16Q569H4 304 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 B3GNT9Q6UX72 402 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 EXOC8Q8IYI6 725 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 C3orf58Q8NDZ4 430 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 SNRNP27Q8WVK2 155 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 SLC7A3Q8WY07 619 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 FGF11Q92914 225 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 GLT8D2Q9H1C3 349 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 PRDM16Q9HAZ2 1276 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 PCDHGB2Q9Y5G2 931 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 ARID2Q68CP9 1835 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 BOD1L1Q8NFC6 3051 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 SYN3O14994 580 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 SDSP20132 328 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 BRCC3P46736 316 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 CLCNKBP51801 687 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 NAPAP54920 295 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 KCNH2Q12809 1159 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 GRIK2Q13002 908 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 PSMD2Q13200 908 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 PDGFRLQ15198 375 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 PLEKHG6Q3KR16 790 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 ARHGAP15Q53QZ3 475 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 PLA2G4FQ68DD2 849 aa8.38□□□□□ -1.07
HMBOX1-208ENST00000521516 SLC36A4Q6YBV0 504 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms