RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PLK4O00444 970 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 MAGEB2O15479 319 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 MAFGO15525 162 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 CFIP05156 583 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 OR1D2P34982 312 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 ZNF76P36508 570 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 SCNN1GP51170 649 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 ATXN3P54252 364 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 RHDQ02161 417 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 SLC14A1Q13336 389 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 DMC1Q14565 340 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 PSMD5Q16401 504 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 KRTAP21-3Q3LHN1 58 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 ZNF746Q6NUN9 644 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 SWSAP1Q6NVH7 229 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 FAM173BQ6P4H8 233 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 TRMT1LQ7Z2T5 733 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 C11orf74Q86VG3 221 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 ENAHQ8N8S7 591 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 BAHD1Q8TBE0 780 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 RLN3Q8WXF3 142 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 MED8Q96G25 268 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 ZFP42Q96MM3 310 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 MAP7D2Q96T17 732 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 PAAF1Q9BRP4 392 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 FDXACB1Q9BRP7 624 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 KAT14Q9H8E8 782 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 RTN4Q9NQC3 1192 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 ZNF302Q9NR11 478 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 MAFBQ9Y5Q3 323 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 PTPRDP23468 1912 aa8.09□□□□□ -1.11
CTNNA1-227ENST00000521387 CNTNAP2Q9UHC6 1331 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 SYCE3A1L190 88 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 ARL5CA6NH57 179 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 DPYSL4O14531 572 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 TRDMT1O14717 391 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 BACH1O14867 736 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 SERPINF2P08697 491 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 MYF5P13349 255 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 PDCP20941 246 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 IGFBP6P24592 240 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 PDIA3P30101 505 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 HOXA11P31270 313 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 ANTXR2P58335 489 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 COPS2P61201 443 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 CCT2P78371 535 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 SEMG2Q02383 582 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 GFPT1Q06210 699 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 RESTQ13127 1097 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 SMAD1Q15797 465 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 IMMTQ16891 758 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 DUOXA1Q1HG43 343 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 RTL10Q7L3V2 364 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 FERMT3Q86UX7 667 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 SPACA3Q8IXA5 215 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 MB21D2Q8IYB1 491 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 NSUN7Q8NE18 718 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 RPLP0P6Q8NHW5 317 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 SNIP1Q8TAD8 396 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 FAM200AQ8TCP9 573 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 WHAMMQ8TF30 809 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 NLRP7Q8WX94 980 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 ZNF274Q96GC6 653 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 LLPHQ9BRT6 129 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 TTPALQ9BTX7 342 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 GCOM2Q9BZD3 368 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 LY9Q9HBG7 655 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 AGO4Q9HCK5 861 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 ATP6V1DQ9Y5K8 247 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 TLN1Q9Y490 2541 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 CENPEQ02224 2701 aa8.08□□□□□ -1.12
CTNNA1-227ENST00000521387 PNMA6FA0A0J9YX94 578 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 E9PAM4 449 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 ZNF197O14709 1029 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 ZNF213O14771 459 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 DHX15O43143 795 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 RRP8O43159 456 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 PRC1O43663 620 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 PDIA4P13667 645 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 HNRNPLP14866 589 aaKnown RBP eCLIP8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 MLH1P40692 756 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 P2RY2P41231 377 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 EVCP57679 992 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 UBE2HP62256 183 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 SPIRE1Q08AE8 756 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 TEAD2Q15562 447 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 FAM171A1Q5VUB5 890 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 FAM160B1Q5W0V3 765 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 TREML4Q6UXN2 200 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 LPCAT2Q7L5N7 544 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 YAF2Q8IY57 180 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 GALNT15Q8N3T1 639 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 FBXL16Q8N461 479 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 MDGA1Q8NFP4 955 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 SHKBP1Q8TBC3 707 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 HASPINQ8TF76 798 aa8.07□□□□□ -1.12
CTNNA1-227ENST00000521387 LIN37Q96GY3 246 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms