RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 COPS5Q92905 334 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 HVCN1Q96D96 273 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 SEC16BQ96JE7 1060 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ACCSQ96QU6 501 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 XPO6Q96QU8 1125 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 RIT2Q99578 217 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 SELENOSQ9BQE4 189 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ZSWIM1Q9BR11 485 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 TXLNGYQ9BZA5 131 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ROPN1BQ9BZX4 212 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ROPN1Q9HAT0 212 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 VTA1Q9NP79 307 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 HOMER3Q9NSC5 361 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 DMAC2Q9NW81 257 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 UVRAGQ9P2Y5 699 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 PCYOX1Q9UHG3 505 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 ATP8A1Q9Y2Q0 1164 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 PCDHA11Q9Y5I1 949 aa9.21□□□□□ -0.94
CTNNA1-223ENST00000520520 IGLV3-22A0A075B6J6 115 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 EPOPA6NHQ4 379 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 RSPH10B2B2RC85 870 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 K7ENM7 598 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 ICAM1P05362 532 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 MMEP08473 750 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 RSPH10BP0C881 870 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 GZMAP12544 262 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 ITGA4P13612 1032 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 CTNNA2P26232 953 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 CASP4P49662 377 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 CPT1AP50416 773 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 SEC24CP53992 1094 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 MFAP3P55082 362 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 POU5F1Q01860 360 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 LMNB2Q03252 620 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 ENPEPQ07075 957 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 NEDD9Q14511 834 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 NBPF20Q3BBV1 942 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 DUSP28Q4G0W2 176 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 ANKRD20A8PQ5CZ79 823 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 ERMARDQ5T6L9 678 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 NIPA1Q7RTP0 329 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 ZNF720Q7Z2F6 126 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 TMCO2Q7Z6W1 182 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 DDX42Q86XP3 938 aaKnown RBP eCLIP9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 TPH2Q8IWU9 490 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 C12orf50Q8NA57 414 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 BBOF1Q8ND07 529 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 GIMAP7Q8NHV1 300 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 CCHCR1Q8TD31 782 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 ATP8B4Q8TF62 1192 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 RAPGEF5Q92565 580 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 KAT2BQ92831 832 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 SGSM3Q96HU1 749 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 DYDC2Q96IM9 177 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 HSD17B14Q9BPX1 270 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 TRIM51Q9BSJ1 452 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 SYT11Q9BT88 431 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 NEUROG2Q9H2A3 272 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 CCDC134Q9H6E4 229 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 KLC4Q9NSK0 619 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 PNMA2Q9UL42 364 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 LHX6Q9UPM6 363 aa9.2□□□□□ -0.94
CTNNA1-223ENST00000520520 A0A1B0GUA9 196 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 SPOPO43791 374 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 PLA2G6O60733 806 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 PSMD10O75832 226 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 ARHGEF15O94989 841 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 ECEL1O95672 775 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 GAS8O95995 478 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 SUPT20HL2P0C7V6 817 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 DRD4P21917 467 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 NMT1P30419 496 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 MMP13P45452 471 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 MXI1P50539 228 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 PDE6CP51160 858 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 VAMP7P51809 220 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 NKX3-2P78367 333 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 PURAQ00577 322 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 CTTNQ14247 550 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 CYP1B1Q16678 543 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 ARHGAP44Q17R89 818 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 CEP55Q53EZ4 464 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 BRDTQ58F21 947 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 KCNV1Q6PIU1 500 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 RNF207Q6ZRF8 634 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 ENOSF1Q7L5Y1 443 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 SPRED2Q7Z698 418 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 OR2W6PQ8NHA6 318 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 DYDC1Q8WWB3 177 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 SLCO2A1Q92959 643 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 ZNF577Q9BSK1 485 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 MTG1Q9BT17 334 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 THAP2Q9H0W7 228 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 GOLPH3Q9H4A6 298 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 SLC40A1Q9NP59 571 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 ZDHHC18Q9NUE0 388 aa9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 INTS9Q9NV88 658 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-223ENST00000520520 DBR1Q9UK59 544 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms