RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SEC24CP53992 1094 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 ZNF280AP59817 542 aaPredicted RBP5.08□□□□□ -1.6
SQLE-204ENST00000520493 MRPS21P82921 87 aaKnown RBP5.08□□□□□ -1.6
SQLE-204ENST00000520493 OCA2Q04671 838 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 MPP3Q13368 585 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 MTM1Q13496 603 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 PGS1Q32NB8 556 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 OLFML1Q6UWY5 402 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 UBE3BQ7Z3V4 1068 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 RSPH3Q86UC2 560 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 NRG4Q8WWG1 115 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 ASB10Q8WXI3 467 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 LINC00476Q8WZB0 136 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 TIFAQ96CG3 184 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 BOD1Q96IK1 185 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 ZSWIM1Q9BR11 485 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 CHST12Q9NRB3 414 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 SYBUQ9NX95 663 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 SLC23A1Q9UHI7 598 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 INTUQ9ULD6 942 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 SIK3Q9Y2K2 1263 aa5.08□□□□□ -1.6
SQLE-204ENST00000520493 TTBK1Q5TCY1 1321 aaPredicted RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 KIAA0391O15091 583 aaKnown RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 SLC16A6O15403 523 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 IFIT2P09913 472 aaKnown RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 EGR2P11161 476 aaPredicted RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 CKBP12277 381 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 RHCEP18577 417 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 CXADRP78310 365 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 FAM193AP78312 1265 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 HSD11B2P80365 405 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 RHDQ02161 417 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 C4orf46Q504U0 113 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 COBLL1Q53SF7 1204 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 PPP4R3AQ6IN85 833 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 COLGALT2Q8IYK4 626 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 SLC44A3Q8N4M1 653 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 NUP133Q8WUM0 1156 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 DPF2Q92785 391 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 HDAC10Q969S8 669 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 STRBPQ96SI9 672 aaKnown RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 PNKPQ96T60 521 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 MPHOSPH6Q99547 160 aaKnown RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 ACO2Q99798 780 aaKnown RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 UBA5Q9GZZ9 404 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 C11orf54Q9H0W9 315 aaPredicted RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 TDP1Q9NUW8 608 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 FBXO34Q9NWN3 711 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 DDX20Q9UHI6 824 aaKnown RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 DMTF1Q9Y222 760 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 IPPQ9Y573 584 aa5.07□□□□□ -1.6
SQLE-204ENST00000520493 CFAP20Q9Y6A4 193 aaKnown RBP5.07□□□□□ -1.6
SQLE-204ENST00000520493 CDHR4A6H8M9 788 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 WNT10BO00744 389 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 TPP1O14773 563 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 HTRA2O43464 458 aaPredicted RBP5.06□□□□□ -1.6
SQLE-204ENST00000520493 ESRRBO95718 433 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 LDHAP00338 332 aaKnown RBP5.06□□□□□ -1.6
SQLE-204ENST00000520493 MTHFD1P11586 935 aaKnown RBP5.06□□□□□ -1.6
SQLE-204ENST00000520493 ITGB6P18564 788 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 SLC6A2P23975 617 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 CXCR5P32302 372 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 CACNB3P54284 484 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 GALEQ14376 348 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 ZNF267Q14586 743 aaPredicted RBP5.06□□□□□ -1.6
SQLE-204ENST00000520493 UAP1L1Q3KQV9 507 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 DACT2Q5SW24 774 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 THEMIS2Q5TEJ8 643 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 B3GNTL1Q67FW5 361 aaPredicted RBP5.06□□□□□ -1.6
SQLE-204ENST00000520493 DENND1CQ8IV53 801 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 KIAA0319LQ8IZA0 1049 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 OR2I1PQ8NGU4 316 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 TMX3Q96JJ7 454 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 MED15Q96RN5 788 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 MYOCQ99972 504 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 CASS4Q9NQ75 786 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 KMT5AQ9NQR1 393 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 TMEM74BQ9NUR3 256 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 SERPINB13Q9UIV8 391 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 INSL6Q9Y581 213 aa5.06□□□□□ -1.6
SQLE-204ENST00000520493 EPN1Q9Y6I3 576 aaPredicted RBP5.06□□□□□ -1.6
SQLE-204ENST00000520493 TCRBV7S2A1N4TA0A589 114 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 IFRD1O00458 451 aaPredicted RBP5.05□□□□□ -1.6
SQLE-204ENST00000520493 KIAA0355O15063 1070 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 SGTAO43765 313 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 HAUS5O94927 633 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 AMY1AP04745 511 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 ELANEP08246 267 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 EDNRBP24530 442 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 AGFG1P52594 562 aaKnown RBP5.05□□□□□ -1.6
SQLE-204ENST00000520493 CTXN1P60606 82 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 CDC42EP1Q00587 391 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 OVCH2Q7RTZ1 564 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 GRAMD1CQ8IYS0 662 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 ZGPATQ8N5A5 531 aaKnown RBP5.05□□□□□ -1.6
SQLE-204ENST00000520493 TBC1D15Q8TC07 691 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 ELAC2Q9BQ52 826 aaKnown RBP5.05□□□□□ -1.6
SQLE-204ENST00000520493 GSTO2Q9H4Y5 243 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 L1RE1Q9UN81 338 aa5.05□□□□□ -1.6
SQLE-204ENST00000520493 AATKQ6ZMQ8 1374 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms