RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 PRPF4BQ13523 1007 aaKnown RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 PCBP1Q15365 356 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLK4-203ENST00000519583 NOTUMQ6P988 496 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 ZPBP2Q6X784 338 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 C15orf39Q6ZRI6 1047 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 CDR2LQ86X02 465 aaPredicted RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 FAM71AQ8IYT1 594 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 SHC3Q92529 594 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 RHOXF2Q9BQY4 288 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 TCHPQ9BT92 498 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 GOLPH3Q9H4A6 298 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 ANKZF1Q9H8Y5 726 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 SLC28A3Q9HAS3 691 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 INSL6Q9Y581 213 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 LCHNA4D1U4 455 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 CLDN3O15551 220 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 TCP1P17987 556 aaKnown RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 ARF4P18085 180 aaPredicted RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 ABCB4P21439 1286 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 AXLP30530 894 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 CLDN10P78369 228 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 BIRC3Q13489 604 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 ZACNQ401N2 412 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 TAF3Q5VWG9 929 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 TDRD10Q5VZ19 366 aaKnown RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 ECHDC2Q86YB7 292 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 CREG2Q8IUH2 290 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 FAM161BQ96MY7 647 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 FZD8Q9H461 694 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 RNF216Q9NWF9 866 aaPredicted RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 INTUQ9ULD6 942 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 PACSIN2Q9UNF0 486 aaPredicted RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 ATP8B3O60423 1300 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 A0A0U1RQF3 1178 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 ACKR2O00590 384 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 TOM1L1O75674 476 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 LDHAP00338 332 aaKnown RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 HLA-DRAP01903 254 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 C4BPAP04003 597 aaKnown RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 PRLRP16471 622 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 TNFSF9P41273 254 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 PIK3CAP42336 1068 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 GATMP50440 423 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 PTPROQ16827 1216 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 PAN2Q504Q3 1202 aaKnown RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 NOP9Q86U38 636 aaKnown RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 SLC47A2Q86VL8 602 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 EPS8L1Q8TE68 723 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 ACO2Q99798 780 aaKnown RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 ARGLU1Q9NWB6 273 aaPredicted RBP8.53□□□□□ -1.04
CLK4-203ENST00000519583 ZNF446Q9NWS9 450 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 TMEM161AQ9NX61 479 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 SMARCAL1Q9NZC9 954 aa8.53□□□□□ -1.04
CLK4-203ENST00000519583 MYO9BQ13459 2157 aa8.52□□□□□ -1.04
CLK4-203ENST00000519583 FGFR1P11362 822 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 FAM189BP81408 668 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 HTRA4P83105 476 aaPredicted RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 FAM187BQ17R55 369 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 TPCN2Q8NHX9 752 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 PNKPQ96T60 521 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 CGRRF1Q99675 332 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 TRIM6Q9C030 488 aaPredicted RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 EHD2Q9NZN4 543 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 NOCTQ9UK39 431 aaKnown RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 CNTNAP2Q9UHC6 1331 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 LAMA2P24043 3122 aaKnown RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 GBF1Q92538 1859 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 VNN1O95497 513 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 TMEM253P0C7T8 217 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 SKIP12755 728 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 CHRNB2P17787 502 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 C2orf54Q08AI8 447 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 BTG3Q14201 252 aaPredicted RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 IFI16Q16666 785 aaKnown RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 UBXN11Q5T124 520 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 SPOPLQ6IQ16 392 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 Q7L0L9 218 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 LRRC57Q8N9N7 239 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 OR5B17Q8NGF7 314 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 LPPQ93052 612 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 ARHGEF26Q96DR7 871 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 PCDHB18PQ96TA0 734 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 EIF2AQ9BY44 585 aaKnown RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 CERS4Q9HA82 394 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 PCDHB2Q9Y5E7 798 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 A0A0A6YYK5 440 aaPredicted RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 ABLIM1O14639 778 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 FAM189A1O60320 539 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 ZC3H11AO75152 810 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLK4-203ENST00000519583 DGKIO75912 1065 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 SEC31AO94979 1220 aaKnown RBP8.52□□□□□ -1.05
CLK4-203ENST00000519583 ARHGEF15O94989 841 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 KRT5P13647 590 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 RAB27AP51159 221 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 BRSK2Q8IWQ3 736 aa8.52□□□□□ -1.05
CLK4-203ENST00000519583 ABI1Q8IZP0 508 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms