RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 RALGAPA2Q2PPJ7 1873 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 ANKRD62A6NC57 917 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 MMEP08473 750 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 ACO1P21399 889 aaKnown RBP15.49■□□□□ 0.07
CLN8-204ENST00000519254 NOP14P78316 857 aaKnown RBP15.49■□□□□ 0.07
CLN8-204ENST00000519254 CDR2Q01850 454 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 CUL2Q13617 745 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 IFI16Q16666 785 aaKnown RBP15.49■□□□□ 0.07
CLN8-204ENST00000519254 CD302Q8IX05 232 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 LINC01599Q8WXQ3 324 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 SEPT8Q92599 483 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 ARHGEF26Q96DR7 871 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 ZFP42Q96MM3 310 aa15.49■□□□□ 0.07
CLN8-204ENST00000519254 ZMAT2Q96NC0 199 aaKnown RBP15.49■□□□□ 0.07
CLN8-204ENST00000519254 FAM170AA1A519 330 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 ASS1P00966 412 aaKnown RBP15.48■□□□□ 0.07
CLN8-204ENST00000519254 CALCAP01258 141 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 FTLP02792 175 aaPredicted RBP15.48■□□□□ 0.07
CLN8-204ENST00000519254 GZMAP12544 262 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 KRT5P13647 590 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 TCP1P17987 556 aaKnown RBP15.48■□□□□ 0.07
CLN8-204ENST00000519254 ABCB4P21439 1286 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 MLH1P40692 756 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 TRPC3Q13507 836 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 PLEKHG4Q58EX7 1191 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 GPR161Q8N6U8 529 aaKnown RBP15.48■□□□□ 0.07
CLN8-204ENST00000519254 SLC35G2Q8TBE7 412 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 RFFLQ8WZ73 363 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 THAP2Q9H0W7 228 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 RGS18Q9NS28 235 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 CNTN3Q9P232 1028 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 C2CD2Q9Y426 696 aa15.48■□□□□ 0.07
CLN8-204ENST00000519254 A0A0U1RQF3 1178 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 RTN2O75298 545 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 ITGB3P05106 788 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 H2AFXP16104 143 aaPredicted RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 CXCR5P32302 372 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 PDE6CP51160 858 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 MYL6P60660 151 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 TCTN1Q2MV58 587 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 FBXO38Q6PIJ6 1188 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 ALKAL1Q6UXT8 129 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 SLFN11Q7Z7L1 901 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 RTN4RL1Q86UN2 441 aaPredicted RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 PDCL2Q8N4E4 241 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 C1orf127Q8N9H9 656 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 NOA1Q8NC60 698 aaKnown RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 CTNNBL1Q8WYA6 563 aaPredicted RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 C18orf25Q96B23 403 aaPredicted RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 RPS6KC1Q96S38 1066 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 GAD1Q99259 594 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 PSMB7Q99436 277 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 FTHL17Q9BXU8 183 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 GOLPH3Q9H4A6 298 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 OSGEPQ9NPF4 335 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 TUBGCP4Q9UGJ1 667 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 CNTN6Q9UQ52 1028 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 SMIM28A0A1B0GU29 152 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 TRIM43BA6NCK2 446 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 ATF7P17544 494 aaPredicted RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 TBXAS1P24557 533 aaPredicted RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 CKAP4Q07065 602 aaKnown RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 AGMOQ6ZNB7 445 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 UBE2Q1Q7Z7E8 422 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 ECHDC2Q86YB7 292 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 TRIM43Q96BQ3 446 aaPredicted RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 TRAIPQ9BWF2 469 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 IMPG2Q9BZV3 1241 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 DPP3Q9NY33 737 aa15.47■□□□□ 0.07
CLN8-204ENST00000519254 PACSIN2Q9UNF0 486 aaPredicted RBP15.47■□□□□ 0.07
CLN8-204ENST00000519254 C9IYK1 514 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 PARNO95453 639 aaKnown RBP15.46■□□□□ 0.07
CLN8-204ENST00000519254 SKIP12755 728 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 RAG1P15918 1043 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 KCNA4P22459 653 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 ITGB8P26012 769 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 POLR2BP30876 1174 aaKnown RBP15.46■□□□□ 0.07
CLN8-204ENST00000519254 TUBB4BP68371 445 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 TCEAL1Q15170 157 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 SLC24A5Q71RS6 500 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 ZNF572Q7Z3I7 529 aaPredicted RBP15.46■□□□□ 0.07
CLN8-204ENST00000519254 MRPL10Q7Z7H8 261 aaKnown RBP15.46■□□□□ 0.07
CLN8-204ENST00000519254 NT5DC4Q86YG4 428 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 UBR7Q8N806 425 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 BEST2Q8NFU1 509 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 APBB2Q92870 758 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 PGBD4Q96DM1 585 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 TSPYL2Q9H2G4 693 aaPredicted RBP15.46■□□□□ 0.07
CLN8-204ENST00000519254 RSAD1Q9HA92 442 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 SIX4Q9UIU6 781 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 COG5Q9UP83 839 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 INPP5FQ9Y2H2 1132 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 STXBP5LQ9Y2K9 1186 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 DERAQ9Y315 318 aa15.46■□□□□ 0.07
CLN8-204ENST00000519254 ARL5CA6NH57 179 aa15.45■□□□□ 0.06
CLN8-204ENST00000519254 PTGESO14684 152 aa15.45■□□□□ 0.06
CLN8-204ENST00000519254 ZNF623O75123 536 aa15.45■□□□□ 0.06
CLN8-204ENST00000519254 CXCL10P02778 98 aa15.45■□□□□ 0.06
CLN8-204ENST00000519254 AFF1P51825 1210 aaKnown RBP15.45■□□□□ 0.06
CLN8-204ENST00000519254 SGSM1Q2NKQ1 1148 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms