RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 POLR2BP30876 1174 aaKnown RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 YARSP54577 528 aaKnown RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 WNT7BP56706 349 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 NOMO3P69849 1222 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 DMTNQ08495 405 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 PPP1R7Q15435 360 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 TERF2Q15554 542 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 TAF1CQ15572 869 aaPredicted RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 HABP4Q5JVS0 413 aaKnown RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 EEF1DP3Q658K8 133 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 DCUN1D2Q6PH85 259 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 MTHFD1LQ6UB35 978 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 MAMDC4Q6UXC1 1216 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 LEKR1Q6ZMV7 388 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 PHF13Q86YI8 300 aaPredicted RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 TTC39CQ8N584 583 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 FAM76AQ8TAV0 307 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 GRK7Q8WTQ7 553 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 MAGOHBQ96A72 148 aaKnown RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 FDXACB1Q9BRP7 624 aaPredicted RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 GCOM2Q9BZD3 368 aaPredicted RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 AP5M1Q9H0R1 490 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 DPH5Q9H2P9 285 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 RNPEPQ9H4A4 650 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 APOBEC3GQ9HC16 384 aaKnown RBP11.45□□□□□ -0.58
SPIDR-204ENST00000517824 ZFYVE28Q9HCC9 887 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 CISHQ9NSE2 258 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 PARVAQ9NVD7 372 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 GOLGA6AQ9NYA3 693 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 IP6K2Q9UHH9 426 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 AMACRQ9UHK6 382 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 FAN1Q9Y2M0 1017 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 PTCH2Q9Y6C5 1203 aa11.45□□□□□ -0.58
SPIDR-204ENST00000517824 TTI1O43156 1089 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 GAS8O95995 478 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CALCAP01258 141 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CYP1A1P04798 512 aaPredicted RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 HOXC6P09630 235 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 STAG3L1P0CL83 205 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 UNGP13051 313 aaPredicted RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ITGA4P13612 1032 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ACO1P21399 889 aaKnown RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 RRM1P23921 792 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 BRD2P25440 801 aaKnown RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ATICP31939 592 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 LMAN1P49257 510 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CARSP49589 748 aaKnown RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CDR1P51861 262 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 POU5F1Q01860 360 aaKnown RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 DCAF12L1Q5VU92 463 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 MON1BQ7L1V2 547 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CATSPER4Q7RTX7 472 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 NT5DC4Q86YG4 428 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CD302Q8IX05 232 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 RHOT1Q8IXI2 618 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CCDC105Q8IYK2 499 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 IPO4Q8TEX9 1081 aaKnown RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 UBLCP1Q8WVY7 318 aaPredicted RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ALG3Q92685 438 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 KRT35Q92764 455 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 EXOC4Q96A65 974 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CYFIP2Q96F07 1278 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CPB2Q96IY4 423 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 BTBD6Q96KE9 485 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ACAP3Q96P50 834 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 UBXN6Q9BZV1 441 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 TRIM6Q9C030 488 aaPredicted RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ZNF518BQ9C0D4 1074 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ARHGAP39Q9C0H5 1083 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 FAM49AQ9H0Q0 323 aaPredicted RBP11.44□□□□□ -0.58
SPIDR-204ENST00000517824 PDZD7Q9H5P4 517 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ASB7Q9H672 318 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 USTQ9Y2C2 406 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 PCDHA3Q9Y5H8 950 aa11.44□□□□□ -0.58
SPIDR-204ENST00000517824 ZSCAN5CA6NGD5 496 aaPredicted RBP11.43□□□□□ -0.58
SPIDR-204ENST00000517824 TTLL13PA6NNM8 815 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 PODXLO00592 558 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 TLR3O15455 904 aaKnown RBP11.43□□□□□ -0.58
SPIDR-204ENST00000517824 FAM189A1O60320 539 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 PROSCO94903 275 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
SPIDR-204ENST00000517824 ITGB3P05106 788 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 NFICP08651 508 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 SMPD1P17405 629 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 SSTR3P32745 418 aaPredicted RBP11.43□□□□□ -0.58
SPIDR-204ENST00000517824 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
SPIDR-204ENST00000517824 GGCXP38435 758 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 RGS2P41220 211 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 MARCKSL1P49006 195 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 CPT1AP50416 773 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 MYO1EQ12965 1108 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 CALCOCO2Q13137 446 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 SGO2Q562F6 1265 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 TLK2Q86UE8 772 aa11.43□□□□□ -0.58
SPIDR-204ENST00000517824 CDR2LQ86X02 465 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms