RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SCOCQ9UIL1 159 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 ANGPTL3Q9Y5C1 460 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 SNX9Q9Y5X1 595 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 MYH6P13533 1939 aa11.41□□□□□ -0.58
PCDHGA1-202ENST00000517417 DDTLA6NHG4 134 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 DYNC1LI2O43237 492 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 MOCS2O96007 188 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 GNAT1P11488 350 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 KRT3P12035 628 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 SKIP12755 728 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 IRX1P78414 480 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 NCOA4Q13772 614 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 ARHGEF6Q15052 776 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC35G1Q2M3R5 365 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 DUPD1Q68J44 220 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 PTF1AQ7RTS3 328 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 ATG4AQ8WYN0 398 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 PRCCQ92733 491 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 TARS2Q9BW92 718 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 UVRAGQ9P2Y5 699 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 FAM47DPA6NHR8 397 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 RGS7P49802 495 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 MARSP56192 900 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 LONP2Q86WA8 852 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 MIPOL1Q8TD10 442 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 TRIM56Q9BRZ2 755 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 GCOM2Q9BZD3 368 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 VPS11Q9H270 941 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 TRABDQ9H4I3 376 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 GPRC5CQ9NQ84 441 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 SHANK3Q9BYB0 1731 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 RARBP10826 455 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 POLE2P56282 527 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 XRCC4Q13426 336 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 TMCO4Q5TGY1 634 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 C4orf33Q8N1A6 199 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 RASGEF1CQ8N431 466 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 KRT35Q92764 455 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 PARVAQ9NVD7 372 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 USH1CQ9Y6N9 552 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 MYH7P12883 1935 aa11.4□□□□□ -0.58
PCDHGA1-202ENST00000517417 ARHGEF37A1IGU5 675 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 SGPL1O95470 568 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 NUDT17P0C025 328 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 TAL1P17542 331 aaPredicted RBP11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 ARSEP51690 589 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 KCNJ2P63252 427 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 CDR2Q01850 454 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 AGGF1Q8N302 714 aaeCLIP11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 AGAP11Q8TF27 550 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 PDCD6IPQ8WUM4 868 aaKnown RBP11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 RBM15Q96T37 977 aaKnown RBP eCLIP11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 RIT2Q99578 217 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 POLR3CQ9BUI4 534 aaPredicted RBP11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 SLC13A1Q9BZW2 595 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 TMEM117Q9H0C3 514 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 UBN1Q9NPG3 1134 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 STOML1Q9UBI4 398 aa11.4□□□□□ -0.59
PCDHGA1-202ENST00000517417 WEE2P0C1S8 567 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 TARSP26639 723 aaKnown RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 DNAJC3Q13217 504 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 SEZ6Q53EL9 994 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 LACTB2Q53H82 288 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 TMTC4Q5T4D3 741 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 PPARGC1AQ9UBK2 798 aaKnown RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 LAMB4A4D0S4 1761 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 GYG2O15488 501 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 GRAP2O75791 330 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 KRT38O76015 456 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 LMNAP02545 664 aaKnown RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 KITP10721 976 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 STX1BP61266 288 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 HEATR6Q6AI08 1181 aaKnown RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 SYDE1Q6ZW31 735 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 ACAP3Q96P50 834 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 LBHD1Q9BQE6 289 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 ERVK-5Q9HDB9 667 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 PIN4Q9Y237 131 aaKnown RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 O00370 1275 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 SNX3O60493 162 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 PYGMP11217 842 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 LCP1P13796 627 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 CDC25CP30307 473 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 EMC2Q15006 297 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 CNGA2Q16280 664 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 C11orf63Q6NUN7 778 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 FASTKD5Q7L8L6 764 aaKnown RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 TTC25Q96NG3 672 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 ASB14A6NK59 587 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 C19orf81C9J6K1 198 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 PDGFRBP09619 1106 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 MMP13P45452 471 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 GSCP56915 257 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 AUHQ13825 339 aaKnown RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 P3H1Q32P28 736 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 ACCSLQ4AC99 568 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms