RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 SOAT2O75908 522 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 CHEK2O96017 543 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 PRKCGP05129 697 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 GNAI3P08754 354 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 PPP3CBP16298 524 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 POU3F3P20264 500 aaPredicted RBP3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 C5AR1P21730 350 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 CYP2C19P33261 490 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 IARSP41252 1262 aaKnown RBP3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 NPTX2P47972 431 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 ZNF280AP59817 542 aaPredicted RBP3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 GNAI1P63096 354 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 MC2RQ01718 297 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SLC10A2Q12908 348 aaPredicted RBP3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 FLYWCH1Q4VC44 716 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 FCRLBQ6BAA4 426 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 TMPRSS9Q7Z410 1059 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 DDX42Q86XP3 938 aaKnown RBP eCLIP3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SLC17A8Q8NDX2 589 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 TMIEQ8NEW7 156 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SCAMP4Q969E2 229 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 FAXDC2Q96IV6 333 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 TRIB1Q96RU8 372 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 HAPLN3Q96S86 360 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 C1QTNF7Q9BXJ2 289 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SLC29A3Q9BZD2 475 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SIDT1Q9NXL6 827 aaKnown RBP3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SPATA31A3Q5VYP0 1347 aa3.42□□□□□ -1.86
SCARNA16.2-201ENST00000516520 A0A0B4J269 797 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SHTN1A0MZ66 631 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 WDR27A2RRH5 827 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 WIPF3A6NGB9 483 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 CCDC154A6NI56 674 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 CGB1A6NKQ9 187 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 TRIAP1O43715 76 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 TTLL1O95922 423 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 MT-CO1P00395 513 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 ERBB2P04626 1255 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 KIF23Q02241 960 aaPredicted RBP3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 TUBB3Q13509 450 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 IL10RAQ13651 578 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 EZH2Q15910 746 aaKnown RBP3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 C3orf36Q3SXR2 165 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 PLAC9Q5JTB6 97 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SYDE2Q5VT97 1194 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SUMO4Q6EEV6 95 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 TSHZ1Q6ZSZ6 1077 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 TTC7BQ86TV6 843 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 CBARPQ8N350 705 aaPredicted RBP3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 POC1BQ8TC44 478 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 NSUN6Q8TEA1 469 aaKnown RBP3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 OSBPL9Q96SU4 736 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 CNPPD1Q9BV87 410 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 FAM126AQ9BYI3 521 aaPredicted RBP3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 SIK2Q9H0K1 926 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 CFAP97Q9P2B7 532 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 RNF7Q9UBF6 113 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 LIMCH1Q9UPQ0 1083 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 ATP8A1Q9Y2Q0 1164 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 NR2E3Q9Y5X4 410 aa3.41□□□□□ -1.86
SCARNA16.2-201ENST00000516520 MANSC4A6NHS7 340 aaPredicted RBP3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 LINC01548A6NM66 108 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 POLRMTO00411 1230 aaKnown RBP3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ARIH2O95376 493 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ELFN1P0C7U0 828 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FTH1P19P0C7X4 201 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 MYBL2P10244 700 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ITPKBP27987 946 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NDUFV1P49821 464 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF81P51508 661 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 EXOSC10Q01780 885 aaKnown RBP3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 LLGL1Q15334 1064 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CCDC93Q567U6 631 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TEDDM1Q5T9Z0 273 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 EGFLAMQ63HQ2 1017 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SLC4A10Q6U841 1118 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 C1QL2Q7Z5L3 287 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 AMIGO2Q86SJ2 522 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FAM9AQ8IZU1 332 aaPredicted RBP3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NSUN7Q8NE18 718 aaKnown RBP3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SCARB1Q8WTV0 552 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 COA7Q96BR5 231 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TEKT5Q96M29 485 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 BRD9Q9H8M2 597 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SPC25Q9HBM1 224 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 EHD3Q9NZN3 535 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 VSX1Q9NZR4 365 aaPredicted RBP3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FLRT1Q9NZU1 646 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF70Q9UC06 446 aaPredicted RBP3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PADI4Q9UM07 663 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SLC45A2Q9UMX9 530 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 COL3A1P02461 1466 aaPredicted RBP3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ADGRA2Q96PE1 1338 aa3.4□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF785A8K8V0 405 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 E9PLN8 166 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 F5H697 171 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 F2RL2O00254 374 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NXPH3O95157 252 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CELA2AP08217 269 aa3.39□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ITGB6P18564 788 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms