RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 AGAP3Q96P47 875 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 CCDC195A0A1B0GUA6 201 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 C5orf58C9J3I9 102 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 GAS2O43903 313 aaKnown RBP16.8■□□□□ 0.28
TRIM41-207ENST00000515223 LINC00116Q8NCU8 138 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 YIPF3Q9GZM5 350 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 DEPDC5O75140 1603 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 HIF1AQ16665 826 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 RBBP8NLQ8NC74 664 aaPredicted RBP16.8■□□□□ 0.28
TRIM41-207ENST00000515223 SLC7A14Q8TBB6 771 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 UVRAGQ9P2Y5 699 aa16.8■□□□□ 0.28
TRIM41-207ENST00000515223 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
TRIM41-207ENST00000515223 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 RPLP2P05387 115 aaKnown RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 THPOP40225 353 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 CARSP49589 748 aaKnown RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 SENP7Q9BQF6 1050 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 ANKZF1Q9H8Y5 726 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 APEX2Q9UBZ4 518 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 PHF20L1A8MW92 1017 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 RSPH10B2B2RC85 870 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 GPR182O15218 404 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 RSPH10BP0C881 870 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 C10orf120Q5SQS8 335 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 RNF168Q8IYW5 571 aaPredicted RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 RDM1Q8NG50 284 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 ATG4CQ96DT6 458 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 ZFP69BQ9UJL9 534 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 NPHP3-ACAD11A0A0J9YXS1 232 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 H7C4K7 107 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 PDHA1P08559 390 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 PIGHQ14442 188 aaPredicted RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 EFHC1Q5JVL4 640 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 UNC45AQ9H3U1 944 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 STN1Q9H668 368 aaKnown RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 WARS2Q9UGM6 360 aaKnown RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 MROH2AA6NES4 1674 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 FOXP2O15409 715 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 HAUS5O94927 633 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 BRAFP15056 766 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 DHX34Q14147 1143 aaKnown RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 PDIA6Q15084 440 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 STX19Q8N4C7 294 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 ATL2Q8NHH9 583 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 LSP1P33241 339 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 TAF6P49848 677 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 SNRPFP62306 86 aaKnown RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 PLEKHH3Q7Z736 793 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 PCSK9Q8NBP7 692 aaKnown RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 C1orf54Q8WWF1 131 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 ARHGEF38Q9NXL2 777 aa16.79■□□□□ 0.28
TRIM41-207ENST00000515223 MAP2P11137 1827 aaKnown RBP16.79■□□□□ 0.28
TRIM41-207ENST00000515223 PLEKP08567 350 aaPredicted RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 FGFR4P22455 802 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 STK4Q13043 487 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 PTRHD1Q6GMV3 140 aaKnown RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 TRIM65Q6PJ69 517 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 LRRC71Q8N4P6 559 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 USP33Q8TEY7 942 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 DPF3Q92784 378 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 RNPC3Q96LT9 517 aaKnown RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 STK33Q9BYT3 514 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 TRIM9Q9C026 710 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 SMYD3Q9H7B4 428 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 YY1AP1Q9H869 796 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 PKP3Q9Y446 797 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 PDS5AQ29RF7 1337 aaKnown RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 IGSF9BQ9UPX0 1349 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 ALDH1A2O94788 518 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 MCF2P10911 925 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 ARFIP2P53365 341 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 MED21Q13503 144 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 COBLL1Q53SF7 1204 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 SPDYAQ5MJ70 313 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 CALML6Q8TD86 181 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 GPR63Q9BZJ6 419 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 ADARB2Q9NS39 739 aaKnown RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 DUSP10Q9Y6W6 482 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 ODC1P11926 461 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 NLRP11P59045 1033 aaKnown RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 SMAD1Q15797 465 aaKnown RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 ERO1BQ86YB8 467 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 TRIM48Q8IWZ4 208 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 TRIM51Q9BSJ1 452 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 ANKEF1Q9NU02 776 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 SUPT20HL2P0C7V6 817 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 FAM200BP0CF97 657 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 FLOT2Q14254 428 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 ATXN7L3BQ96GX2 97 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 PRMT1Q99873 361 aaKnown RBP16.78■□□□□ 0.28
TRIM41-207ENST00000515223 DPP7Q9UHL4 492 aa16.78■□□□□ 0.28
TRIM41-207ENST00000515223 ARIH2O95376 493 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 PTPRN2Q92932 1015 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 UBQLN1Q9UMX0 589 aaKnown RBP16.77■□□□□ 0.28
TRIM41-207ENST00000515223 C2CD2LO14523 706 aa16.77■□□□□ 0.28
TRIM41-207ENST00000515223 NPTXRO95502 500 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms