RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 CDH23Q9H251 3354 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 B3GAT3O94766 335 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 PLEKP08567 350 aaPredicted RBP17.99■□□□□ 0.47
AP3S1-208ENST00000515066 CLCN1P35523 988 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 ZNF132P52740 706 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 TNNC1P63316 161 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 ARID5AQ03989 594 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 RASIP1Q5U651 963 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 OLIG1Q8TAK6 271 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 HASPINQ8TF76 798 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 BAG1Q99933 345 aaPredicted RBP17.99■□□□□ 0.47
AP3S1-208ENST00000515066 CYP3A43Q9HB55 503 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 ACP6Q9NPH0 428 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 HMGXB4Q9UGU5 601 aa17.99■□□□□ 0.47
AP3S1-208ENST00000515066 TMEM189-UBE2V1I3L0A0 370 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 GJB5O95377 273 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 SKILP12757 684 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 P4HA1P13674 534 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 CD58P19256 250 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 PRKCIP41743 596 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 MAGEA10P43363 369 aaPredicted RBP17.98■□□□□ 0.47
AP3S1-208ENST00000515066 CDK17Q00537 523 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 INCA1Q0VD86 236 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 TIGD5Q53EQ6 642 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 DCLRE1AQ6PJP8 1040 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 TMEM270Q6UE05 265 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 WHAMMQ8TF30 809 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 KBTBD7Q8WVZ9 684 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 FAM193BQ96PV7 902 aaPredicted RBP17.98■□□□□ 0.47
AP3S1-208ENST00000515066 MMS19Q96T76 1030 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 CWH43Q9H720 699 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 L1RE1Q9UN81 338 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 NME7Q9Y5B8 376 aa17.98■□□□□ 0.47
AP3S1-208ENST00000515066 CHD9Q3L8U1 2897 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 CYP26A1O43174 497 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 CILPO75339 1184 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 FERP16591 822 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 PBX3P40426 434 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 OR1G1P47890 313 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 SLC11A1P49279 550 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 HTRA4P83105 476 aaPredicted RBP17.97■□□□□ 0.47
AP3S1-208ENST00000515066 ASIC2Q16515 512 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 SENP8Q96LD8 212 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 MRPL45Q9BRJ2 306 aaKnown RBP17.97■□□□□ 0.47
AP3S1-208ENST00000515066 SYT11Q9BT88 431 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 MARCH5Q9NX47 278 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 PRG3Q9Y2Y8 225 aaPredicted RBP17.97■□□□□ 0.47
AP3S1-208ENST00000515066 NR2E3Q9Y5X4 410 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 MYH10P35580 1976 aa17.97■□□□□ 0.47
AP3S1-208ENST00000515066 SOWAHDA6NJG2 315 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 I3L4J1 428 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 NRP1O14786 923 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 GALTP07902 379 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 KRT5P13647 590 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 USP8P40818 1118 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 BRCC3P46736 316 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 TSR1Q2NL82 804 aaKnown RBP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 SLC47A2Q86VL8 602 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 TMEM173Q86WV6 379 aaPredicted RBP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 PDCL2Q8N4E4 241 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 RBBP8NLQ8NC74 664 aaPredicted RBP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 CCDC112Q8NEF3 446 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 EPS8L1Q8TE68 723 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 TWNKQ96RR1 684 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 TMEM175Q9BSA9 504 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 FAM124BQ9H5Z6 455 aaPredicted RBP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 PCDHB4Q9Y5E5 795 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 M0QZQ0 153 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 CYB561D2O14569 222 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 TACC1O75410 805 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 CALCAP01258 141 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 SERPING1P05155 500 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 PTK2Q05397 1052 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 HS1BP3Q53T59 392 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 C9orf50Q5SZB4 431 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 SMYD5Q6GMV2 418 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 CYP26C1Q6V0L0 522 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 CMTR2Q8IYT2 770 aaKnown RBP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 TOP6BLQ8N6T0 577 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 HAUS4Q9H6D7 363 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 ZNHIT6Q9NWK9 470 aaKnown RBP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 NOCTQ9UK39 431 aaKnown RBP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 BARX2Q9UMQ3 279 aaPredicted RBP17.96■□□□□ 0.47
AP3S1-208ENST00000515066 SLC4A7Q9Y6M7 1214 aa17.96■□□□□ 0.47
AP3S1-208ENST00000515066 PTPRDP23468 1912 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 LINC00271P0C7V0 271 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 RAD23BP54727 409 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 BCAR1P56945 870 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 KLHL30Q0D2K2 578 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 MTF1Q14872 753 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 ASTE1Q2TB18 679 aaPredicted RBP17.95■□□□□ 0.46
AP3S1-208ENST00000515066 ZNF394Q53GI3 561 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 WSCD1Q658N2 575 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 RAD9BQ6WBX8 426 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 DPH6Q7L8W6 267 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 ZNF571Q7Z3V5 609 aaPredicted RBP17.95■□□□□ 0.46
AP3S1-208ENST00000515066 TMTC1Q8IUR5 882 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 FMNL3Q8IVF7 1028 aa17.95■□□□□ 0.46
AP3S1-208ENST00000515066 APPL2Q8NEU8 664 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms