RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 HTATSF1O43719 755 aaKnown RBP4.53□□□□□ -1.68
CAST-242ENST00000515063 CDK11BP21127 795 aaKnown RBP4.53□□□□□ -1.68
CAST-242ENST00000515063 GPR3P46089 330 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 INHBEP58166 350 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 NUCB1Q02818 461 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 KLF1Q13351 362 aaPredicted RBP4.53□□□□□ -1.68
CAST-242ENST00000515063 ATP2B3Q16720 1220 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 MFSD14BQ5SR56 506 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 LAIR1Q6GTX8 287 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 SKAP1Q86WV1 359 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 ITPRIPQ8IWB1 547 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 PQLC1Q8N2U9 271 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 TMEM57Q8N5G2 664 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 TSR2Q969E8 191 aaKnown RBP4.53□□□□□ -1.68
CAST-242ENST00000515063 SNX21Q969T3 373 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 CEP95Q96GE4 821 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 TTPALQ9BTX7 342 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 SENP6Q9GZR1 1112 aaPredicted RBP4.53□□□□□ -1.68
CAST-242ENST00000515063 IKZF4Q9H2S9 585 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 VTA1Q9NP79 307 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 AKIP1Q9NQ31 210 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 SAP30BPQ9UHR5 308 aaKnown RBP4.53□□□□□ -1.68
CAST-242ENST00000515063 SCOCQ9UIL1 159 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 TNNQ9UQP3 1299 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 CHST2Q9Y4C5 530 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 GPR45Q9Y5Y3 372 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 USP6P35125 1406 aa4.53□□□□□ -1.68
CAST-242ENST00000515063 ARHGEF10O15013 1369 aa4.53□□□□□ -1.69
CAST-242ENST00000515063 XRN1Q8IZH2 1706 aaKnown RBP4.52□□□□□ -1.69
CAST-242ENST00000515063 AHRRA9YTQ3 701 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 FOXN1O15353 648 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 B3GALT2O43825 422 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 ZSCAN20P17040 1043 aaPredicted RBP4.52□□□□□ -1.69
CAST-242ENST00000515063 ATP5JP18859 108 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 BMPR1AP36894 532 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 MCAMP43121 646 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 MTNR1BP49286 362 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 RNASE9P60153 205 aaKnown RBP4.52□□□□□ -1.69
CAST-242ENST00000515063 ERVK-21P61565 698 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 BLOC1S1P78537 153 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 MGAT2Q10469 447 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 SMN1Q16637 294 aaKnown RBP4.52□□□□□ -1.69
CAST-242ENST00000515063 TWISTNBQ3B726 338 aaPredicted RBP4.52□□□□□ -1.69
CAST-242ENST00000515063 BMP2KLQ5H9B9 411 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 ZNF627Q7L945 461 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.52□□□□□ -1.69
CAST-242ENST00000515063 RPAP2Q8IXW5 612 aaPredicted RBP4.52□□□□□ -1.69
CAST-242ENST00000515063 CMIPQ8IY22 773 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 RNF169Q8NCN4 708 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 COG1Q8WTW3 980 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 CASKIN2Q8WXE0 1202 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 MANSC1Q9H8J5 431 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 CYP4F11Q9HBI6 524 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 BABAM1Q9NWV8 329 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 SLC5A4Q9NY91 659 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 ATP11BQ9Y2G3 1177 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 LAS1LQ9Y4W2 734 aaKnown RBP4.52□□□□□ -1.69
CAST-242ENST00000515063 HS3ST4Q9Y661 456 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 FER1L4A9Z1Z3 1794 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 N4BP2Q86UW6 1770 aaPredicted RBP4.52□□□□□ -1.69
CAST-242ENST00000515063 SBNO1A3KN83 1393 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 RTL1A6NKG5 1358 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 KDRP35968 1356 aa4.52□□□□□ -1.69
CAST-242ENST00000515063 PTPRCP08575 1304 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 ACEP12821 1306 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 TRIM75PA6NK02 468 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 CXorf49A8MYA2 514 aaPredicted RBP4.51□□□□□ -1.69
CAST-242ENST00000515063 LEFTY2O00292 366 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 CHL1O00533 1208 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 ADCY6O43306 1168 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 RAP2AP10114 183 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 GSPT1P15170 499 aaKnown RBP4.51□□□□□ -1.69
CAST-242ENST00000515063 ALOX15P16050 662 aaPredicted RBP4.51□□□□□ -1.69
CAST-242ENST00000515063 PTMSP20962 102 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 NR4A1P22736 598 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 SREBF1P36956 1147 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 AVPR1BP47901 424 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 NOMO1Q15155 1222 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 CRB2Q5IJ48 1285 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 ANKS6Q68DC2 871 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 LHFPL2Q6ZUX7 228 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 CHD1LQ86WJ1 897 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 RPUSD2Q8IZ73 545 aaKnown RBP4.51□□□□□ -1.69
CAST-242ENST00000515063 PHACTR3Q96KR7 559 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 CHMP4AQ9BY43 222 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 C22orf23Q9BZE7 217 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 C11orf21Q9P2W6 132 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 EID1Q9Y6B2 187 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 FPGT-TNNI3KV9GXZ4 949 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 NCOA3Q9Y6Q9 1424 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 PEAK1Q9H792 1746 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 FLT4P35916 1363 aa4.51□□□□□ -1.69
CAST-242ENST00000515063 LRRC37A3O60309 1634 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 TMEM200CA6NKL6 621 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 PPFIA2O75334 1257 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 NCR1O76036 304 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 POMCP01189 267 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 GCP02774 474 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 HMOX1P09601 288 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 ALAS1P13196 640 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms