RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 UCHL3P15374 230 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 RABGGTBP53611 331 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 UBE3AQ05086 875 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 CUL2Q13617 745 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 TRIM14Q14142 442 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 TIGD5Q53EQ6 642 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 SPECC1LQ69YQ0 1117 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 DDX53Q86TM3 631 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 TMEM130Q8N3G9 435 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 UBR7Q8N806 425 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 NEK11Q8NG66 645 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 MAFAQ8NHW3 353 aaPredicted RBP12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 SENP8Q96LD8 212 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 PI4K2AQ9BTU6 479 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 PBX4Q9BYU1 374 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 CEP72Q9P209 647 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 CACNG4Q9UBN1 327 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 CNTN6Q9UQ52 1028 aa12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 YBX2Q9Y2T7 364 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 PRG3Q9Y2Y8 225 aaPredicted RBP12.84□□□□□ -0.35
PDLIM5-220ENST00000514830 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.84□□□□□ -0.353e-6■□□□□ 10.3
PDLIM5-220ENST00000514830 GABRDO14764 452 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 HUS1O60921 280 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 TADA2AO75478 443 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 CA3P07451 260 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 ODC1P11926 461 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 FGFR3P22607 806 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 WARSP23381 471 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 MFAP3P55082 362 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 YWHAEP62258 255 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 TNNC1P63316 161 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 PLCB2Q00722 1185 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 TAP1Q03518 808 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 MRPL58Q14197 206 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 SOWAHAQ2M3V2 549 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 SPOPLQ6IQ16 392 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 FUT10Q6P4F1 479 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 UNC93AQ86WB7 457 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 TMEM173Q86WV6 379 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 ARHGEF19Q8IW93 802 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 APPL2Q8NEU8 664 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 BCL7CQ8WUZ0 217 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 SHC3Q92529 594 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 TATDN2Q93075 761 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 TMEM169Q96HH4 297 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 TGS1Q96RS0 853 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 LSM14BQ9BX40 385 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 OXCT2Q9BYC2 517 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 STK33Q9BYT3 514 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 CHST7Q9NS84 486 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 SNX9Q9Y5X1 595 aa12.83□□□□□ -0.36
PDLIM5-220ENST00000514830 ATG2AQ2TAZ0 1938 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 TMEM265A0A087WTH1 108 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 F8W810 466 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 CYB561D2O14569 222 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 EPHB6O15197 1021 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 FGF18O76093 207 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 OAZ2O95190 189 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 ADCY5O95622 1261 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 SOD2P04179 222 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 TRIM21P19474 475 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 ACO1P21399 889 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 IGFBP6P24592 240 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 KLK7P49862 253 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 JAM2P57087 298 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 KRT17Q04695 432 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 TBX2Q13207 712 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 ARID5BQ14865 1188 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 IQCEQ6IPM2 695 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 PDXDC1Q6P996 788 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 DSTYKQ6XUX3 929 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 FMNL3Q8IVF7 1028 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 PPM1KQ8N3J5 372 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 PDCL2Q8N4E4 241 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 KBTBD7Q8WVZ9 684 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 RABGGTAQ92696 567 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 KREMEN1Q96MU8 473 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 CDX2Q99626 313 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 C11orf84Q9BUA3 381 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 VN1R3Q9BXE9 311 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 GPR62Q9BZJ7 368 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 UBE2TQ9NPD8 197 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 FAM207AQ9NSI2 230 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 DNAJC12Q9UKB3 198 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 CAPN11Q9UMQ6 739 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 L1RE1Q9UN81 338 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 PTPRDP23468 1912 aa12.82□□□□□ -0.36
PDLIM5-220ENST00000514830 NT5C1B-RDH14C9J2C7 533 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 ARHGEF15O94989 841 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 GYPCP04921 128 aa12.81□□□□□ -0.36
PDLIM5-220ENST00000514830 MYOGP15173 224 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms