RNA–Protein interactions for RNA: ENST00000514520.5

CNGA1-208, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 2

Gene CNGA1, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-208ENST00000514520 PGBD4Q96DM1 585 aa4.91□□□□□ -1.62
CNGA1-208ENST00000514520 MLST8Q9BVC4 326 aa4.91□□□□□ -1.62
CNGA1-208ENST00000514520 MYOZ2Q9NPC6 264 aa4.91□□□□□ -1.62
CNGA1-208ENST00000514520 IL23AQ9NPF7 189 aa4.91□□□□□ -1.62
CNGA1-208ENST00000514520 POLLQ9UGP5 575 aa4.91□□□□□ -1.62
CNGA1-208ENST00000514520 REXO2Q9Y3B8 237 aaKnown RBP4.91□□□□□ -1.62
CNGA1-208ENST00000514520 LRRFIP2Q9Y608 721 aaKnown RBP4.91□□□□□ -1.62
CNGA1-208ENST00000514520 TAF1P21675 1872 aa4.91□□□□□ -1.62
CNGA1-208ENST00000514520 SH3TC1Q8TE82 1336 aa4.91□□□□□ -1.62
CNGA1-208ENST00000514520 POLR2AP24928 1970 aaKnown RBP4.91□□□□□ -1.62
CNGA1-208ENST00000514520 UBA6A0AVT1 1052 aaPredicted RBP4.9□□□□□ -1.63
CNGA1-208ENST00000514520 PTPDC1A2A3K4 754 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 PLD2O14939 933 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 PPP1R12AO14974 1030 aaPredicted RBP4.9□□□□□ -1.63
CNGA1-208ENST00000514520 RAB11FIP3O75154 756 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 NPTXRO95502 500 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 GPSM2P81274 684 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 NUCB1Q02818 461 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 ROM1Q03395 351 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 G3BP1Q13283 466 aaKnown RBP eCLIP4.9□□□□□ -1.63
CNGA1-208ENST00000514520 OS9Q13438 667 aaPredicted RBP4.9□□□□□ -1.63
CNGA1-208ENST00000514520 DGKDQ16760 1214 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 FAM214AQ32MH5 1076 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 SLC9C1Q4G0N8 1177 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 PRAMEF9Q5VWM5 478 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 KANSL1Q7Z3B3 1105 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 ARMC9Q7Z3E5 817 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 MRGPREQ86SM8 312 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 CHD1LQ86WJ1 897 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 ULK2Q8IYT8 1036 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 TBC1D16Q8TBP0 767 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 SSH3Q8TE77 659 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 MIEF2Q96C03 454 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 DYDC2Q96IM9 177 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 ISCA1Q9BUE6 129 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 PITHD1Q9GZP4 211 aaPredicted RBP4.9□□□□□ -1.63
CNGA1-208ENST00000514520 POLR3BQ9NW08 1133 aaPredicted RBP4.9□□□□□ -1.63
CNGA1-208ENST00000514520 PARPBPQ9NWS1 579 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 TRPS1Q9UHF7 1281 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 TRMT112Q9UI30 125 aaKnown RBP4.9□□□□□ -1.63
CNGA1-208ENST00000514520 UTYO14607 1347 aa4.9□□□□□ -1.63
CNGA1-208ENST00000514520 KIAA0100Q14667 2235 aaKnown RBP4.89□□□□□ -1.63
CNGA1-208ENST00000514520 PCCAP05165 728 aaPredicted RBP4.89□□□□□ -1.63
CNGA1-208ENST00000514520 VSIG10L2P0DP72 767 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 SLC9A1P19634 815 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 MAN2A2P49641 1150 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 SP3Q02447 781 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 MTX1Q13505 466 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 SF3B3Q15393 1217 aaKnown RBP4.89□□□□□ -1.63
CNGA1-208ENST00000514520 UBE3BQ7Z3V4 1068 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 UBE2Q1Q7Z7E8 422 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 MRGPRGQ86SM5 289 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 CXorf67Q86X51 503 aaPredicted RBP4.89□□□□□ -1.63
CNGA1-208ENST00000514520 ERC1Q8IUD2 1116 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 APOBEC3FQ8IUX4 373 aaKnown RBP4.89□□□□□ -1.63
CNGA1-208ENST00000514520 PLA2G15Q8NCC3 412 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 CELF1Q92879 486 aaKnown RBP4.89□□□□□ -1.63
CNGA1-208ENST00000514520 GCDHQ92947 438 aaPredicted RBP4.89□□□□□ -1.63
CNGA1-208ENST00000514520 LPPQ93052 612 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 MKL1Q969V6 931 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 SUCLG2Q96I99 432 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 ELF4Q99607 663 aaPredicted RBP4.89□□□□□ -1.63
CNGA1-208ENST00000514520 GPR87Q9BY21 358 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 LRRCC1Q9C099 1032 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 KCMF1Q9P0J7 381 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 XDHP47989 1333 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 MYO3BQ8WXR4 1341 aa4.89□□□□□ -1.63
CNGA1-208ENST00000514520 CUL9Q8IWT3 2517 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 PNMA6EA0A0J9YXQ4 647 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 CBX4O00257 560 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 WNT10BO00744 389 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 H2AFYO75367 372 aaKnown RBP4.88□□□□□ -1.63
CNGA1-208ENST00000514520 UFL1O94874 794 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 IGFALSP35858 605 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 MMP14P50281 582 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 ARHGEF6Q15052 776 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 CCDC57Q2TAC2 916 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 SLC4A8Q2Y0W8 1093 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 TAF7LQ5H9L4 462 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 TTC38Q5R3I4 469 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 PIK3R6Q5UE93 754 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 LMBR1LQ6UX01 489 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 BMP8AQ7Z5Y6 402 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 VRK3Q8IV63 474 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 ANKRD35Q8N283 1001 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 MB21D1Q8N884 522 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 PIK3C3Q8NEB9 887 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 GPR150Q8NGU9 434 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 GFM2Q969S9 779 aaKnown RBP4.88□□□□□ -1.63
CNGA1-208ENST00000514520 WDR92Q96MX6 357 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 TTPALQ9BTX7 342 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 CPEB1Q9BZB8 566 aaKnown RBP4.88□□□□□ -1.63
CNGA1-208ENST00000514520 ENKD1Q9H0I2 346 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 BICC1Q9H694 974 aaKnown RBP4.88□□□□□ -1.63
CNGA1-208ENST00000514520 ZMAT4Q9H898 229 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 STXBP5LQ9Y2K9 1186 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 NOP58Q9Y2X3 529 aaKnown RBP4.88□□□□□ -1.63
CNGA1-208ENST00000514520 MED23Q9ULK4 1368 aa4.88□□□□□ -1.63
CNGA1-208ENST00000514520 OTOFQ9HC10 1997 aa4.87□□□□□ -1.63
CNGA1-208ENST00000514520 A0A0A6YYJ9 748 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms