RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 MAGEA13PA6NCF6 341 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PRR23AA6NEV1 266 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 K7EPI3 171 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 HIP1O00291 1037 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PPEF1O14829 653 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 HGSO14964 777 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 N4BP1O75113 896 aaKnown RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 SFPQP23246 707 aaKnown RBP eCLIP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 HTR3AP46098 478 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 BCAMP50895 628 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 TKTL1P51854 596 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PRAMEP78395 509 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 GALNT1Q10472 559 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 CASP8Q14790 479 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ANKRD20A8PQ5CZ79 823 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ANKRD20A2Q5SQ80 823 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ANKRD20A3Q5VUR7 823 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 NCAPH2Q6IBW4 605 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 SEZ6L2Q6UXD5 910 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 NLRC3Q7RTR2 1065 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 TPH2Q8IWU9 490 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 FBXO15Q8NCQ5 510 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 TBATAQ96M53 351 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 SELENOSQ9BQE4 189 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 CARD9Q9H257 536 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 TRPV4Q9HBA0 871 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ZDHHC4Q9NPG8 344 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 KLHL9Q9P2J3 617 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ASIC3Q9UHC3 531 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 VAV3Q9UKW4 847 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 TRIM33Q9UPN9 1127 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 GPR52Q9Y2T5 361 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-208ENST00000514335 PCDHB3Q9Y5E6 796 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 ELP1O95163 1332 aa7.63□□□□□ -1.19
NIPBL-208ENST00000514335 KIAA1217Q5T5P2 1943 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TRBV23OR9-2A0A075B6M9 112 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 A0A1B0GVL5 298 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 KANSL1LA0AUZ9 987 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TISP43B9A030 160 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 B9A039 149 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 MASP2O00187 686 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 FSCN2O14926 492 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ECDO95905 644 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 JAK1P23458 1154 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 AFF1P51825 1210 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CASP9P55211 416 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CDK18Q07002 472 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 APOBRQ0VD83 1088 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 DUSP4Q13115 394 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 NCAPHQ15003 741 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SMAD1Q15797 465 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CYP27C1Q4G0S4 372 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 PDCD4Q53EL6 469 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 Q6ZUG5 572 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TMC7Q7Z402 723 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 C12orf50Q8NA57 414 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 STRBPQ96SI9 672 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 COQ7Q99807 217 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 NUP85Q9BW27 656 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SPZ1Q9BXG8 430 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 VCX3AQ9NNX9 186 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 GGA2Q9UJY4 613 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SPEF1Q9Y4P9 236 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 PCDHB12Q9Y5F1 795 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SLITRK3O94933 977 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 EGFRP00533 1210 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 DLATP10515 647 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TAGLN2P37802 199 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ABCG1P45844 678 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 PEX3P56589 373 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 GPX6P59796 221 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ZBTB16Q05516 673 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 PICALMQ13492 652 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 COTL1Q14019 142 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 GALEQ14376 348 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TLR1Q15399 786 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SNAP47Q5SQN1 464 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ALG1LQ6GMV1 187 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 PM20D1Q6GTS8 502 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 VSIG1Q86XK7 387 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TREML1Q86YW5 311 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CEP97Q8IW35 865 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CYP4X1Q8N118 509 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ZNF321PQ8N8H1 164 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 RUFY2Q8WXA3 655 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 METTL21AQ8WXB1 218 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CINPQ9BW66 212 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TDRD1Q9BXT4 1180 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 MROH8Q9H579 483 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 VTA1Q9NP79 307 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SLC35C2Q9NQQ7 365 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 LMBRD1Q9NUN5 540 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 ENOPH1Q9UHY7 261 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TRHDEQ9UKU6 1024 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 TDRKHQ9Y2W6 561 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CHTOPQ9Y3Y2 248 aaKnown RBP7.62□□□□□ -1.19
NIPBL-208ENST00000514335 CACNG2Q9Y698 323 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 MAGEB16A2A368 324 aa7.62□□□□□ -1.19
NIPBL-208ENST00000514335 SH3D21A4FU49 640 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms