RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 RASGRP4Q8TDF6 673 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 DDX1Q92499 740 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 DDX12PQ92771 950 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 SERPINB12Q96P63 405 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 HINFPQ9BQA5 517 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CCDC28BQ9BUN5 200 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CPVLQ9H3G5 476 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 RNPEPL1Q9HAU8 725 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 FLRT1Q9NZU1 646 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 COL20A1Q9P218 1284 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 VAV3Q9UKW4 847 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 NOVA2Q9UNW9 492 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 RALGAPA2Q2PPJ7 1873 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 ADAMTS4O75173 837 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 GNAT1P11488 350 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 KLRC2P26717 231 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 MSH2P43246 934 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 GUCY2FP51841 1108 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 SNAP25P60880 206 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 MTMR1Q13613 665 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 DGKDQ16760 1214 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 SMYD5Q6GMV2 418 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 TLK2Q86UE8 772 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 SLC9A9Q8IVB4 645 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CCDC197Q8NCU1 140 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 OR6J1Q8NGC5 347 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 U2AF1L4Q8WU68 220 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 TBC1D5Q92609 795 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 SLC5A5Q92911 643 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 TOX2Q96NM4 488 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 HERPUD2Q9BSE4 406 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 TEKT3Q9BXF9 490 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CNTN3Q9P232 1028 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 AMACRQ9UHK6 382 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 PHF2O75151 1096 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 TXNP10599 105 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CREB1P16220 341 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 EIF2AK2P19525 551 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CD151P48509 253 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 INHBCP55103 352 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 WDR4P57081 412 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 ROR2Q01974 943 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CTTNQ14247 550 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 INF2Q27J81 1249 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 PLPPR4Q7Z2D5 763 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CYP4X1Q8N118 509 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 ARMC2Q8NEN0 867 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 ARPC5LQ9BPX5 153 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 PAIP2Q9BPZ3 127 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 WDR83Q9BRX9 315 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 CELF4Q9BZC1 486 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 RBM38Q9H0Z9 239 aaKnown RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 UNC93B1Q9H1C4 597 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 OLFML3Q9NRN5 406 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 PCMTD2Q9NV79 361 aa7.88□□□□□ -1.15
CLIP1-205ENST00000514271 USP15Q9Y4E8 981 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-205ENST00000514271 FSCN2O14926 492 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 BUD23O43709 281 aaKnown RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 LGR5O75473 907 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 ATG7O95352 703 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SUPT20HL2P0C7V6 817 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 ELNP15502 786 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 CALB2P22676 271 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 CLCN2P51788 898 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 PMS2P54278 862 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 CDC42EP1Q00587 391 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 ENPEPQ07075 957 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SPA17Q15506 151 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 CCL14Q16627 93 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 TMEM266Q2M3C6 531 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 PLEKHG4Q58EX7 1191 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 CCDC121Q6ZUS5 278 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 PALB2Q86YC2 1186 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 JAMLQ86YT9 394 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 GBP7Q8N8V2 638 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 PRCCQ92733 491 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 ARHGEF26Q96DR7 871 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SPAG5Q96R06 1193 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 RABEP2Q9H5N1 569 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 C11orf49Q9H6J7 331 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 AGO4Q9HCK5 861 aaKnown RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 WHRNQ9P202 907 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 ZFATQ9P243 1243 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 MCM3APO60318 1980 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 TRIM64BA6NI03 449 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 CAPN14A8MX76 684 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 BUB1BO60566 1050 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 FARP2O94887 1054 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-205ENST00000514271 CYP1A2P05177 515 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 COL6A1P12109 1028 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 WASHC2DQ5SRD0 308 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 NUGGCQ68CJ6 796 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 USP17L6PQ6QN14 398 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 ANKS1BQ7Z6G8 1248 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 NELFCDQ8IXH7 590 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 ERMNQ8TAM6 284 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 PARD3BQ8TEW8 1205 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 BICD1Q96G01 975 aa7.87□□□□□ -1.15
CLIP1-205ENST00000514271 SCYL1Q96KG9 808 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms