RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 NDUFA10O95299 355 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 PGK2P07205 417 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 RHOCP08134 193 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 GPD1P21695 349 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 KRT31Q15323 416 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 MAPRE2Q15555 327 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 CCDC38Q502W7 563 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 ACER1Q8TDN7 264 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 EEF2KMTQ96G04 330 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 C7orf25Q9BPX7 421 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 DESI2Q9BSY9 194 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 ZCCHC2Q9C0B9 1178 aaKnown RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 VPS11Q9H270 941 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 SAYSD1Q9NPB0 183 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 MRGBPQ9NV56 204 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 GOLGA8TH3BQL2 631 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 WNT10BO00744 389 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 STX7O15400 261 aaKnown RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 TLR2O60603 784 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 ATP5BP06576 529 aaKnown RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 GRK4P32298 578 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 GTF2H1P32780 548 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 NDUFV1P49821 464 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 FXR2P51116 673 aaKnown RBP eCLIP4.46□□□□□ -1.74e-8■■■■■ 35.7
VCAN-209ENST00000513016 ALDH5A1P51649 535 aaPredicted RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 RBBP7Q16576 425 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 EDRF1Q3B7T1 1238 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 RGL4Q8IZJ4 473 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 RNF25Q96BH1 459 aaPredicted RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 P2RX7Q99572 595 aaKnown RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 DNAJC7Q99615 494 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 CIPCQ9C0C6 399 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 WDCPQ9H6R7 721 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 WDR41Q9HAD4 459 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 SCUBE2Q9NQ36 999 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 PCDHB2Q9Y5E7 798 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 CTIFO43310 598 aaKnown RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 FTCDO95954 541 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 POMCP01189 267 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 ADH1AP07327 375 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 SETSIPP0DME0 302 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 ERVK-10P10266 1014 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 PTPN3P26045 913 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 GRK3P35626 688 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 RGS7P49802 495 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 NCKAP1LP55160 1127 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 EIF3EP60228 445 aaKnown RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 POU5F1BQ06416 359 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 BYSLQ13895 437 aaKnown RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 RCN2Q14257 317 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 MMS22LQ6ZRQ5 1243 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 LINC00523Q86TU6 105 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 SLC35F6Q8N357 371 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 DAGLBQ8NCG7 672 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.46□□□□□ -1.7
VCAN-209ENST00000513016 PDCD2LQ9BRP1 358 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 OXCT2Q9BYC2 517 aaPredicted RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 ZMYND12Q9H0C1 365 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 ATXN3LQ9H3M9 355 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.46□□□□□ -1.7
VCAN-209ENST00000513016 LNPEPQ9UIQ6 1025 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 SLC39A10Q9ULF5 831 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 PXDNLA1KZ92 1463 aa4.46□□□□□ -1.7
VCAN-209ENST00000513016 MAPK13O15264 365 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SUPT3HO75486 399 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 FGBP02675 491 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 NCAM1P13591 858 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 VCPP55072 806 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 FASTKD1Q53R41 847 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 PLA2G4FQ68DD2 849 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 NAPEPLDQ6IQ20 393 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 C11orf57Q6ZUT1 292 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 GBP7Q8N8V2 638 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 PHF20Q9BVI0 1012 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 STK33Q9BYT3 514 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 RSAD1Q9HA92 442 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 RAD18Q9NS91 495 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 GTSE1Q9NYZ3 720 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 DBR1Q9UK59 544 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 GAKO14976 1311 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 C2orf81A6NN90 581 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 TLL1O43897 1013 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 CHRNA3P32297 505 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 C4orf19Q8IY42 314 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 DACT3Q96B18 629 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 PRPF18Q99633 342 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 TINF2Q9BSI4 451 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 TARS2Q9BW92 718 aaKnown RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 MAF1Q9H063 256 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SPHKAPQ2M3C7 1700 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 SLC12A8A0AV02 714 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 HEATR9A2RTY3 570 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 ZNF263O14978 683 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 FARP2O94887 1054 aaPredicted RBP4.45□□□□□ -1.7
VCAN-209ENST00000513016 KRT16P08779 473 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 CLCN1P35523 988 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 APLP1P51693 650 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 KRT72Q14CN4 511 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 BOLA3Q53S33 107 aa4.45□□□□□ -1.7
VCAN-209ENST00000513016 DACT2Q5SW24 774 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms