RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ENKD1Q9H0I2 346 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 MEGF9Q9H1U4 602 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 RSAD1Q9HA92 442 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 ZSCAN32Q9NX65 697 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 ZDHHC8Q9ULC8 765 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 ATP11BQ9Y2G3 1177 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 SH3BP1Q9Y3L3 701 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 PAXBP1Q9Y5B6 917 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 PTPRKQ15262 1439 aa5.14□□□□□ -1.59
HTT-210ENST00000512909 ANO9A1A5B4 782 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 CDHR4A6H8M9 788 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 ZNF785A8K8V0 405 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 F2RL2O00254 374 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 FOXN3O00409 490 aaPredicted RBP5.13□□□□□ -1.59
HTT-210ENST00000512909 PMM2O15305 246 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 HRGP04196 525 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 ITGB1P05556 798 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 ACO1P21399 889 aaKnown RBP5.13□□□□□ -1.59
HTT-210ENST00000512909 PRDX5P30044 214 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 MAN2A2P49641 1150 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 AGFG1P52594 562 aaKnown RBP5.13□□□□□ -1.59
HTT-210ENST00000512909 SOX8P57073 446 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 NKX6-1P78426 367 aaPredicted RBP5.13□□□□□ -1.59
HTT-210ENST00000512909 ATP8B2P98198 1209 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 PIGFQ07326 219 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 ZNF844Q08AG5 666 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 DCAF17Q5H9S7 520 aaPredicted RBP5.13□□□□□ -1.59
HTT-210ENST00000512909 METTL24Q5JXM2 366 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 DACT2Q5SW24 774 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 SYCP2LQ5T4T6 812 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 UTP14CQ5TAP6 766 aaKnown RBP5.13□□□□□ -1.59
HTT-210ENST00000512909 ANKS6Q68DC2 871 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 IL31Q6EBC2 164 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 KIAA0319LQ8IZA0 1049 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 SLC17A8Q8NDX2 589 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 IL17RDQ8NFM7 739 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 SLC35B2Q8TB61 432 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 ADOQ96SZ5 270 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 MYD88Q99836 296 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 MYOCQ99972 504 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 C1orf43Q9BWL3 253 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 IMPG2Q9BZV3 1241 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 XYLT2Q9H1B5 865 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.13□□□□□ -1.59
HTT-210ENST00000512909 RLIMQ9NVW2 624 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 RTEL1Q9NZ71 1219 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 JKAMPQ9P055 326 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 RNF181Q9P0P0 153 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 L1RE1Q9UN81 338 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.13□□□□□ -1.59
HTT-210ENST00000512909 NUP155O75694 1391 aa5.13□□□□□ -1.59
HTT-210ENST00000512909 PTPN23Q9H3S7 1636 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 CLTCQ00610 1675 aaKnown RBP5.12□□□□□ -1.59
HTT-210ENST00000512909 FOXS1O43638 330 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 TOM1O60784 492 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 PEX14O75381 377 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 AGFG2O95081 481 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 RARBP10826 455 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 PHKA1P46020 1223 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 NEK3P51956 506 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 USP14P54578 494 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 AK2P54819 239 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 RAB32Q13637 225 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 UBE4AQ14139 1066 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 VPS72Q15906 364 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 SPDYE7PQ495Y7 208 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 LMBRD2Q68DH5 695 aaPredicted RBP5.12□□□□□ -1.59
HTT-210ENST00000512909 ZNF365Q70YC5 407 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 FAM43AQ8N2R8 423 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 MPP5Q8N3R9 675 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 MOGAT1Q96PD6 335 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 DCLRE1CQ96SD1 692 aaKnown RBP5.12□□□□□ -1.59
HTT-210ENST00000512909 CDK5RAP1Q96SZ6 601 aaKnown RBP5.12□□□□□ -1.59
HTT-210ENST00000512909 SMOQ99835 787 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 POLR3GLQ9BT43 218 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 APOL5Q9BWW9 433 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 MRPL46Q9H2W6 279 aaKnown RBP5.12□□□□□ -1.59
HTT-210ENST00000512909 ZMAT3Q9HA38 289 aaKnown RBP5.12□□□□□ -1.59
HTT-210ENST00000512909 PNPLA8Q9NP80 782 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 SACM1LQ9NTJ5 587 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 SRRDQ9UH36 339 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 MTO1Q9Y2Z2 717 aaKnown RBP5.12□□□□□ -1.59
HTT-210ENST00000512909 CEP83Q9Y592 693 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 NPATQ14207 1427 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 NCOA1Q15788 1441 aa5.12□□□□□ -1.59
HTT-210ENST00000512909 ISM1B1AKI9 464 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 M0QYG6 137 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 APAF1O14727 1248 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 PRICKLE3O43900 615 aaPredicted RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 SLC43A1O75387 559 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 CHEK2O96017 543 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 AHSGP02765 367 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 HLA-DOAP06340 250 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 THP07101 528 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 ZNF135P52742 658 aaPredicted RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 CHN2P52757 468 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 CTSWP56202 376 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 EXOSC9Q06265 439 aaKnown RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 GRM1Q13255 1194 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 PRKD1Q15139 912 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms