RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 USP40Q9NVE5 1235 aa8.55□□□□□ -1.04
RFC1-214ENST00000512726 RGL1Q9NZL6 768 aa8.55□□□□□ -1.04
RFC1-214ENST00000512726 NCDNQ9UBB6 729 aa8.55□□□□□ -1.04
RFC1-214ENST00000512726 SLC23A1Q9UHI7 598 aa8.55□□□□□ -1.04
RFC1-214ENST00000512726 FBXO2Q9UK22 296 aaPredicted RBP8.55□□□□□ -1.04
RFC1-214ENST00000512726 PMF1-BGLAPU3KQ54 211 aa8.55□□□□□ -1.04
RFC1-214ENST00000512726 ZMYM3Q14202 1370 aa8.55□□□□□ -1.04
RFC1-214ENST00000512726 TEX51A0A1B0GUA7 166 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 TMEM233B4DJY2 109 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 IPO5O00410 1097 aaKnown RBP8.54□□□□□ -1.04
RFC1-214ENST00000512726 DNAJB5O75953 348 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 INMTO95050 263 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 LDHCP07864 332 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 ITGA5P08648 1049 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 GABRB3P28472 473 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 ADCY7P51828 1080 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 UCP3P55916 312 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 PSMC1P62191 440 aaKnown RBP8.54□□□□□ -1.04
RFC1-214ENST00000512726 USP10Q14694 798 aaKnown RBP8.54□□□□□ -1.04
RFC1-214ENST00000512726 TIGD6Q17RP2 521 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 AMOTQ4VCS5 1084 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 ZMAT1Q5H9K5 638 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 TANGO2Q6ICL3 276 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 CMTM4Q8IZR5 234 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 STYXQ8WUJ0 223 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 RUBCNQ92622 972 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 SPSB4Q96A44 273 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 CEP95Q96GE4 821 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 AJUBAQ96IF1 538 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 SEC62Q99442 399 aaKnown RBP8.54□□□□□ -1.04
RFC1-214ENST00000512726 NDC1Q9BTX1 674 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 SIK2Q9H0K1 926 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 KCNH6Q9H252 994 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 GPR35Q9HC97 309 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 IGSF9Q9P2J2 1179 aa8.54□□□□□ -1.04
RFC1-214ENST00000512726 MYOCOSA0A1B0GUC4 107 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 PIP5K1BO14986 540 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 SNRPA1P09661 255 aaKnown RBP8.53□□□□□ -1.04
RFC1-214ENST00000512726 ALAS1P13196 640 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 RPL13P26373 211 aaKnown RBP8.53□□□□□ -1.04
RFC1-214ENST00000512726 POLE2P56282 527 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 FBXO47Q5MNV8 452 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 RETSATQ6NUM9 610 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 ZNF529Q6P280 563 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 USP17L6PQ6QN14 398 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 USP30Q70CQ3 517 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 KRT28Q7Z3Y7 464 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 ZNF384Q8TF68 577 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 EID2BQ96D98 161 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 RPL10LQ96L21 214 aaKnown RBP8.53□□□□□ -1.04
RFC1-214ENST00000512726 CNPPD1Q9BV87 410 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 EPB41L4BQ9H329 900 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 HEYLQ9NQ87 328 aaPredicted RBP8.53□□□□□ -1.04
RFC1-214ENST00000512726 MID2Q9UJV3 735 aa8.53□□□□□ -1.04
RFC1-214ENST00000512726 LAS1LQ9Y4W2 734 aaKnown RBP8.53□□□□□ -1.04
RFC1-214ENST00000512726 ZNF785A8K8V0 405 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 CXorf49A8MYA2 514 aaPredicted RBP8.52□□□□□ -1.05
RFC1-214ENST00000512726 EYA2O00167 538 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 HAUS5O94927 633 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 AMHP03971 560 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 A1BGP04217 495 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 EPHB3P54753 998 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 NPEPPSP55786 919 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 ADCK5Q3MIX3 580 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 ANKRD45Q5TZF3 282 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 USP37Q86T82 979 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 GATAD2AQ86YP4 633 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 SLC30A5Q8TAD4 765 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 LIN37Q96GY3 246 aaPredicted RBP8.52□□□□□ -1.05
RFC1-214ENST00000512726 KATNAL1Q9BW62 490 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 MCOLN1Q9GZU1 580 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 MS4A7Q9GZW8 240 aaPredicted RBP8.52□□□□□ -1.05
RFC1-214ENST00000512726 TMEM168Q9H0V1 697 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 KIF17Q9P2E2 1029 aa8.52□□□□□ -1.05
RFC1-214ENST00000512726 PJA2O43164 708 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 SEMA7AO75326 666 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 MBD4O95243 580 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 TNFRSF6BO95407 300 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 ITGA2BP08514 1039 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 BTF3P20290 206 aaKnown RBP8.51□□□□□ -1.05
RFC1-214ENST00000512726 ZNF135P52742 658 aaPredicted RBP8.51□□□□□ -1.05
RFC1-214ENST00000512726 IRX6P78412 446 aaPredicted RBP8.51□□□□□ -1.05
RFC1-214ENST00000512726 SLC29A2Q14542 456 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 UBE3BQ7Z3V4 1068 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 FRMD5Q7Z6J6 570 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 MOGAT3Q86VF5 341 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 OR14K1Q8NGZ2 314 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 STT3BQ8TCJ2 826 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 SCAMP4Q969E2 229 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 PRPF18Q99633 342 aaKnown RBP8.51□□□□□ -1.05
RFC1-214ENST00000512726 SLC26A6Q9BXS9 759 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 TINAGL1Q9GZM7 467 aaPredicted RBP8.51□□□□□ -1.05
RFC1-214ENST00000512726 ENKD1Q9H0I2 346 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 BARX1Q9HBU1 254 aaPredicted RBP8.51□□□□□ -1.05
RFC1-214ENST00000512726 XPR1Q9UBH6 696 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 TMEM98Q9Y2Y6 226 aa8.51□□□□□ -1.05
RFC1-214ENST00000512726 M0QYG6 137 aa8.5□□□□□ -1.05
RFC1-214ENST00000512726 CHEK2O96017 543 aa8.5□□□□□ -1.05
RFC1-214ENST00000512726 ZNF888P0CJ79 500 aaPredicted RBP8.5□□□□□ -1.05
RFC1-214ENST00000512726 XRCC6P12956 609 aaKnown RBP eCLIP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms