RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RPS7P62081 194 aaKnown RBP3.08□□□□□ -1.92
PDGFC-208ENST00000512711 ZNF844Q08AG5 666 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 AKNAD1Q5T1N1 836 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 TSTD2Q5T7W7 516 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 ZNF788Q6ZQV5 615 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 ZNF365Q70YC5 407 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 MIGA2Q7L4E1 593 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 CLNKQ7Z7G1 428 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 DDB2Q92466 427 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 DPF1Q92782 380 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 SPC25Q9HBM1 224 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 CPNE5Q9HCH3 593 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 DKK3Q9UBP4 350 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.08□□□□□ -1.92
PDGFC-208ENST00000512711 SAP30BPQ9UHR5 308 aaKnown RBP3.08□□□□□ -1.92
PDGFC-208ENST00000512711 MCM8Q9UJA3 840 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 AOX1Q06278 1338 aa3.08□□□□□ -1.92
PDGFC-208ENST00000512711 CCDC195A0A1B0GUA6 201 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 DNAJC9-AS1A6NH13 148 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 LINC00473A8K010 186 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 INO80B-WBP1J3KQ70 363 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 SGTAO43765 313 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 VPS4BO75351 444 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 ZRANB2O95218 330 aaKnown RBP eCLIP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 RHOP08100 348 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 GRIA3P42263 894 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 TOB1P50616 345 aaPredicted RBP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 ANXA11P50995 505 aaKnown RBP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 FXR1P51114 621 aaKnown RBP eCLIP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 KRTAP10-11P60412 298 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 PSMC1P62191 440 aaKnown RBP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 PTPRRQ15256 657 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 GADL1Q6ZQY3 521 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 MICALCLQ6ZW33 695 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 NECAB2Q7Z6G3 386 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 AMIGO2Q86SJ2 522 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 SRRM1Q8IYB3 904 aaKnown RBP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 PRPF38AQ8NAV1 312 aaKnown RBP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 POC1BQ8TC44 478 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 NSUN6Q8TEA1 469 aaKnown RBP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 NELL1Q92832 810 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 MTMR8Q96EF0 704 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 TRIB1Q96RU8 372 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 TIMP4Q99727 224 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 C1orf43Q9BWL3 253 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 PACSIN1Q9BY11 444 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 INO80BQ9C086 356 aaPredicted RBP3.07□□□□□ -1.92
PDGFC-208ENST00000512711 AMBRA1Q9C0C7 1298 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 CALCOCO1Q9P1Z2 691 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 PCDHA3Q9Y5H8 950 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 ENTPD2Q9Y5L3 495 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 ADGRA2Q96PE1 1338 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 WASHC2CQ9Y4E1 1318 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 CADPSQ9ULU8 1353 aa3.07□□□□□ -1.92
PDGFC-208ENST00000512711 SHTN1A0MZ66 631 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 MANSC4A6NHS7 340 aaPredicted RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 POLRMTO00411 1230 aaKnown RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 TOR1BO14657 336 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 PROP1O75360 226 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 GJB1P08034 283 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 PDHA1P08559 390 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 SLC16A1P53985 500 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 POU6F2P78424 691 aaPredicted RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 EXOSC10Q01780 885 aaKnown RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 SRSF4Q08170 494 aaKnown RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 BOP1Q14137 746 aaKnown RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 HABP2Q14520 560 aaPredicted RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 RAB39AQ14964 217 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 ATP2B3Q16720 1220 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 PTPN21Q16825 1174 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 TXNRD1Q16881 649 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 UAP1L1Q3KQV9 507 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 CCDC93Q567U6 631 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 PAPD7Q5XG87 772 aaKnown RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 TAPT1Q6NXT6 567 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 RASAL3Q86YV0 1011 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 FAM9AQ8IZU1 332 aaPredicted RBP3.06□□□□□ -1.92
PDGFC-208ENST00000512711 SSH1Q8WYL5 1049 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 SNX19Q92543 992 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 ANKS1AQ92625 1134 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 RFKQ969G6 155 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 UROC1Q96N76 676 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 ETAA1Q9NY74 926 aa3.06□□□□□ -1.92
PDGFC-208ENST00000512711 F5H697 171 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 KIF20AO95235 890 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 NR2F6P10588 404 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 CHRM3P20309 590 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 NPTX2P47972 431 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 SP2Q02086 613 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 TFF2Q03403 129 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 HLXQ14774 488 aaPredicted RBP3.05□□□□□ -1.92
PDGFC-208ENST00000512711 EFCAB2Q5VUJ9 269 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 TAF2Q6P1X5 1199 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 PNMA8AQ86V59 439 aaPredicted RBP3.05□□□□□ -1.92
PDGFC-208ENST00000512711 PGBD1Q96JS3 809 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 BRD9Q9H8M2 597 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 SLAMF7Q9NQ25 335 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 KLC4Q9NSK0 619 aa3.05□□□□□ -1.92
PDGFC-208ENST00000512711 FNDC1Q4ZHG4 1894 aaPredicted RBP3.05□□□□□ -1.92
PDGFC-208ENST00000512711 WDR91A4D1P6 747 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms