RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 MUC6Q6W4X9 2439 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 ANO9A1A5B4 782 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 CYB561D2O14569 222 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 TEX28O15482 410 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 B4GALT3O60512 393 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 GPR37L1O60883 481 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 OAZ2O95190 189 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 HNRNPA1P09651 372 aaKnown RBP eCLIP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 CPB1P15086 417 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 POLR2BP30876 1174 aaKnown RBP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 OR1D2P34982 312 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 BRCC3P46736 316 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 PLD1Q13393 1074 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 RAB33AQ14088 237 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 COL19A1Q14993 1142 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 CTC1Q2NKJ3 1217 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 SGSM1Q2NKQ1 1148 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 SKOR2Q2VWA4 1001 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 ZNF667Q5HYK9 610 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 WDR44Q5JSH3 913 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 PPM1LQ5SGD2 360 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 CCDC183Q5T5S1 534 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 PTCRAQ6ISU1 281 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 ANKRD54Q6NXT1 300 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 TRAPPC11Q7Z392 1133 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 FRMD5Q7Z6J6 570 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 FILIP1Q7Z7B0 1213 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 RNF168Q8IYW5 571 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 TOP6BLQ8N6T0 577 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 ANKRD20A12PQ8NF67 263 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 PARD3BQ8TEW8 1205 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 C2orf15Q8WU43 125 aaKnown RBP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 NELFBQ8WX92 580 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 AUTS2Q8WXX7 1259 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 MMS19Q96T76 1030 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 PAAF1Q9BRP4 392 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 MTMR12Q9C0I1 747 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 NAT10Q9H0A0 1025 aaKnown RBP8.03□□□□□ -1.12
NR1I3-231ENST00000512340 SNX25Q9H3E2 840 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 LMBRD1Q9NUN5 540 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 ZDHHC7Q9NXF8 308 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 HCFC2Q9Y5Z7 792 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 XIRP2A4UGR9 3374 aa8.03□□□□□ -1.12
NR1I3-231ENST00000512340 PLXNA4Q9HCM2 1894 aa8.02□□□□□ -1.12
NR1I3-231ENST00000512340 LILRB3O75022 631 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 EFEMP2O95967 443 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 LRG1P02750 347 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 CYP11A1P05108 521 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 PTMAP06454 111 aaKnown RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ERCC5P28715 1186 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 TKTP29401 623 aaKnown RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 PIK3CAP42336 1068 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 TUFMP49411 452 aaKnown RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 AARSP49588 968 aaKnown RBP eCLIP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 CLCN4P51793 760 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ARPP19P56211 112 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 YWHAEP62258 255 aaKnown RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 TAF12Q16514 161 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 NFE2Q16621 373 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ZNF699Q32M78 642 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 RTP2Q5QGT7 225 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 KRT39Q6A163 491 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ANKRD40Q6AI12 368 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ISM2Q6H9L7 571 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 IQCEQ6IPM2 695 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 SLC8B1Q6J4K2 584 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 PRSS55Q6UWB4 352 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 C15orf39Q6ZRI6 1047 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 TAS1R1Q7RTX1 841 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ADGRD2Q7Z7M1 963 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 PALB2Q86YC2 1186 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 EFCAB13Q8IY85 973 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 SMYD4Q8IYR2 804 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 C1orf127Q8N9H9 656 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 KREMEN2Q8NCW0 462 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 CMASQ8NFW8 434 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ZNF461Q8TAF7 563 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 LNX1Q8TBB1 728 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ACSF2Q96CM8 615 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 FAXDC2Q96IV6 333 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 KCNH6Q9H252 994 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 IKZF4Q9H2S9 585 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ADAM7Q9H2U9 754 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 FAM124BQ9H5Z6 455 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 MAN1C1Q9NR34 630 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ANO10Q9NW15 660 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 GDAP2Q9NXN4 497 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 AFF4Q9UHB7 1163 aaKnown RBP8.02□□□□□ -1.13
NR1I3-231ENST00000512340 RWDD2AQ9UIY3 292 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 CTNND2Q9UQB3 1225 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 NR2E1Q9Y466 385 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 SNX9Q9Y5X1 595 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 CDY1Q9Y6F8 540 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 ATP8B3O60423 1300 aa8.02□□□□□ -1.13
NR1I3-231ENST00000512340 PDCD11Q14690 1871 aaKnown RBP8.01□□□□□ -1.13
NR1I3-231ENST00000512340 F8W810 466 aa8.01□□□□□ -1.13
NR1I3-231ENST00000512340 H3BQ06 376 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms