RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 FAM83CQ9BQN1 747 aa10.05□□□□□ -0.8
NUP54-211ENST00000512151 NUSAP1Q9BXS6 441 aaKnown RBP10.05□□□□□ -0.8
NUP54-211ENST00000512151 GKN1Q9NS71 199 aa10.05□□□□□ -0.8
NUP54-211ENST00000512151 OBP2AQ9NY56 170 aa10.05□□□□□ -0.8
NUP54-211ENST00000512151 RGL1Q9NZL6 768 aa10.05□□□□□ -0.8
NUP54-211ENST00000512151 AFF4Q9UHB7 1163 aaKnown RBP10.05□□□□□ -0.8
NUP54-211ENST00000512151 PPME1Q9Y570 386 aa10.05□□□□□ -0.8
NUP54-211ENST00000512151 PCDH15Q96QU1 1955 aa10.05□□□□□ -0.8
NUP54-211ENST00000512151 CYP3A7-CYP3A51PA0A087WV96 503 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 GOLGA8AA7E2F4 631 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 GOLGA8BA8MQT2 603 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 TK2O00142 265 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 DPYSL4O14531 572 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 SLC27A2O14975 620 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 ATXN7O15265 892 aaPredicted RBP10.04□□□□□ -0.8
NUP54-211ENST00000512151 ZBTB43O43298 467 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 SLC37A4O43826 429 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 FTH1P19P0C7X4 201 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 ARSAP15289 507 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 CYP3A7P24462 503 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 YWHABP31946 246 aaKnown RBP10.04□□□□□ -0.8
NUP54-211ENST00000512151 RDXP35241 583 aaKnown RBP10.04□□□□□ -0.8
NUP54-211ENST00000512151 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 TFDP1Q14186 410 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 C8orf34Q49A92 452 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 USP39Q53GS9 565 aaKnown RBP10.04□□□□□ -0.8
NUP54-211ENST00000512151 GPR158Q5T848 1215 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 EEF1DP3Q658K8 133 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 RIN3Q8TB24 985 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 RLN3Q8WXF3 142 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 LXNQ9BS40 222 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 NFKBIZQ9BYH8 718 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 EBF3Q9H4W6 596 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 GDAQ9Y2T3 454 aa10.04□□□□□ -0.8
NUP54-211ENST00000512151 GOLGA4Q13439 2230 aaKnown RBP10.04□□□□□ -0.8
NUP54-211ENST00000512151 A0A087WV48 116 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 J3QKU1 62 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 TRAPPC3O43617 180 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 SH3BP5O60239 455 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 P4HBP07237 508 aaKnown RBP10.03□□□□□ -0.8
NUP54-211ENST00000512151 HNRNPLP14866 589 aaKnown RBP eCLIP10.03□□□□□ -0.8
NUP54-211ENST00000512151 GNA11P29992 359 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 MCM2P49736 904 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 PPP2R5CQ13362 524 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 RUNX3Q13761 415 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 CTXN3Q4LDR2 81 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 SLC23A3Q6PIS1 610 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 SLCO6A1Q86UG4 719 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 RASSF3Q86WH2 238 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 C4orf19Q8IY42 314 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 TMEFF1Q8IYR6 380 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 TSTD1Q8NFU3 115 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 OLIG1Q8TAK6 271 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 RUFY2Q8WXA3 655 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 ESYT1Q9BSJ8 1104 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 GTPBP2Q9BX10 602 aaKnown RBP10.03□□□□□ -0.8
NUP54-211ENST00000512151 PTPRQQ9UMZ3 2332 aa10.03□□□□□ -0.8
NUP54-211ENST00000512151 H7C4K7 107 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 PYCARD-AS1I3L0S3 204 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 TNFRSF10BO14763 440 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 ARHGAP6O43182 974 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 CFIP05156 583 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 OR4Q2P0C623 313 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 CYP4F8P98187 520 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 CYP4F3Q08477 520 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.8
NUP54-211ENST00000512151 TRIP6Q15654 476 aaKnown RBP10.02□□□□□ -0.8
NUP54-211ENST00000512151 ANO7Q6IWH7 933 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 C11orf74Q86VG3 221 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 SYT12Q8IV01 421 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 TMEM130Q8N3G9 435 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 TTC9BQ8N6N2 239 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 MDGA1Q8NFP4 955 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 BEST2Q8NFU1 509 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 DYDC2Q96IM9 177 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 P2RY13Q9BPV8 354 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 POLR3FQ9H1D9 316 aaPredicted RBP10.02□□□□□ -0.8
NUP54-211ENST00000512151 ATXN3LQ9H3M9 355 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 FZD8Q9H461 694 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 GPRC5CQ9NQ84 441 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 VPS54Q9P1Q0 977 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 DKK4Q9UBT3 224 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 TBX20Q9UMR3 447 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 CCL26Q9Y258 94 aa10.02□□□□□ -0.8
NUP54-211ENST00000512151 PTPN13Q12923 2485 aa10.02□□□□□ -0.81
NUP54-211ENST00000512151 KLF18A0A0U1RQI7 1052 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 PODXLO00592 558 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 SYN3O14994 580 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 N4BP3O15049 544 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 OPHN1O60890 802 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 SOAT2O75908 522 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 DRD1P21728 446 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 ITPKAP23677 461 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 WEE1P30291 646 aa10.01□□□□□ -0.81
NUP54-211ENST00000512151 EXOSC10Q01780 885 aaKnown RBP10.01□□□□□ -0.81
NUP54-211ENST00000512151 CYP4A11Q02928 519 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms