RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TAF3Q5VWG9 929 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 UNC93AQ86WB7 457 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 CEP112Q8N8E3 955 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 RSPH1Q8WYR4 309 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 DEFB118Q96PH6 123 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 PPP1R10Q96QC0 940 aaKnown RBP16.22■□□□□ 0.19
SCLT1-209ENST00000511426 APOL6Q9BWW8 343 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 CRISPLD2Q9H0B8 497 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 LCMT1Q9UIC8 334 aa16.22■□□□□ 0.19
SCLT1-209ENST00000511426 CES2O00748 559 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 COL6A1P12109 1028 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 SELPP16109 830 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 NOP2P46087 812 aaKnown RBP16.21■□□□□ 0.19
SCLT1-209ENST00000511426 TAF6P49848 677 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 C1orf53Q5VUE5 145 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 FBXO46Q6PJ61 603 aaPredicted RBP16.21■□□□□ 0.19
SCLT1-209ENST00000511426 TRAF7Q6Q0C0 670 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 CTU1Q7Z7A3 348 aaKnown RBP16.21■□□□□ 0.19
SCLT1-209ENST00000511426 SLFN11Q7Z7L1 901 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 PALB2Q86YC2 1186 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 PHF13Q86YI8 300 aaPredicted RBP16.21■□□□□ 0.19
SCLT1-209ENST00000511426 TPCN2Q8NHX9 752 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 TRPV6Q9H1D0 765 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 LHX5Q9H2C1 402 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 RNF14Q9UBS8 474 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 TUBGCP4Q9UGJ1 667 aa16.21■□□□□ 0.19
SCLT1-209ENST00000511426 PDCD11Q14690 1871 aaKnown RBP16.21■□□□□ 0.19
SCLT1-209ENST00000511426 BUB1O43683 1085 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 EOMESO95936 686 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 CYP1A2P05177 515 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 THP07101 528 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 WEE2P0C1S8 567 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 CD58P19256 250 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 C1QTNF8P60827 252 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 NOMO3P69849 1222 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.18
SCLT1-209ENST00000511426 LRRC8DQ7L1W4 858 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 TMEM35BQ8NCS4 154 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 TMEM176AQ96HP8 235 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 RPGRIP1Q96KN7 1286 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 THAP2Q9H0W7 228 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 RNF39Q9H2S5 420 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 RGS18Q9NS28 235 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.18
SCLT1-209ENST00000511426 TAS2R14Q9NYV8 317 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 SNX12Q9UMY4 172 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 POLIQ9UNA4 740 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 HYOU1Q9Y4L1 999 aa16.21■□□□□ 0.18
SCLT1-209ENST00000511426 TMCO5BA8MYB1 307 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 PTGESO14684 152 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 CTIFO43310 598 aaKnown RBP16.2■□□□□ 0.18
SCLT1-209ENST00000511426 PALMO75781 387 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 VDRP11473 427 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 ABCB4P21439 1286 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 RPL9P32969 192 aaKnown RBP16.2■□□□□ 0.18
SCLT1-209ENST00000511426 RAD23BP54727 409 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 CKAP4Q07065 602 aaKnown RBP16.2■□□□□ 0.18
SCLT1-209ENST00000511426 LIN9Q5TKA1 542 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 C11orf63Q6NUN7 778 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 SCARA5Q6ZMJ2 495 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 LRRC57Q8N9N7 239 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 ANKLE1Q8NAG6 615 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 SLC35G2Q8TBE7 412 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 SPATA18Q8TC71 538 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 APBB2Q92870 758 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 ELMO3Q96BJ8 720 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 TOX2Q96NM4 488 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 NT5C1AQ9BXI3 368 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 RSAD1Q9HA92 442 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 ACP6Q9NPH0 428 aa16.2■□□□□ 0.18
SCLT1-209ENST00000511426 GRID2IPA4D2P6 1211 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 KPNA7A9QM74 516 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 ATP1A1P05023 1023 aaKnown RBP16.19■□□□□ 0.18
SCLT1-209ENST00000511426 GRIK3Q13003 919 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 MTFR1Q15390 333 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 GLRA4Q5JXX5 417 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 MEI1Q5TIA1 1274 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 SLC24A5Q71RS6 500 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 LIMS2Q7Z4I7 341 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 MCOLN2Q8IZK6 566 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 MSANTD4Q8NCY6 345 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 MNS1Q8NEH6 495 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 C18orf25Q96B23 403 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-209ENST00000511426 ARMC5Q96C12 935 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 DDX27Q96GQ7 796 aaKnown RBP16.19■□□□□ 0.18
SCLT1-209ENST00000511426 UROC1Q96N76 676 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 MMS19Q96T76 1030 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 ADAM2Q99965 735 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 SMYD3Q9H7B4 428 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 MRPL47Q9HD33 250 aaKnown RBP16.19■□□□□ 0.18
SCLT1-209ENST00000511426 SCINQ9Y6U3 715 aa16.19■□□□□ 0.18
SCLT1-209ENST00000511426 CALB1P05937 261 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 MLH1P40692 756 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 GUCY2FP51841 1108 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 CNGA2Q16280 664 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 SCARA3Q6AZY7 606 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 AGMOQ6ZNB7 445 aa16.18■□□□□ 0.18
SCLT1-209ENST00000511426 MON1BQ7L1V2 547 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms