RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 NRIP1P48552 1158 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 TNNC1P63316 161 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 NOP14P78316 857 aaKnown RBP11.18□□□□□ -0.62
NR1I3-227ENST00000510951 KCNH2Q12809 1159 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 NCAPHQ15003 741 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 TCP11X2Q5H9J9 407 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 CDKAL1Q5VV42 579 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 KIAA0319Q5VV43 1072 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 WSCD1Q658N2 575 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 LUZP1Q86V48 1076 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 APPL2Q8NEU8 664 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 PIK3R5Q8WYR1 880 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 SEMA4DQ92854 862 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 MMS19Q96T76 1030 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 BPIFA3Q9BQP9 254 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 IMPG2Q9BZV3 1241 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 XYLT2Q9H1B5 865 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 TSPY26PQ9H489 355 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 IGFLR1Q9H665 355 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 SMYD3Q9H7B4 428 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 CBX8Q9HC52 389 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 NGRNQ9NPE2 291 aaKnown RBP11.18□□□□□ -0.62
NR1I3-227ENST00000510951 CHST7Q9NS84 486 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 NXF1Q9UBU9 619 aaKnown RBP11.18□□□□□ -0.62
NR1I3-227ENST00000510951 L1RE1Q9UN81 338 aa11.18□□□□□ -0.62
NR1I3-227ENST00000510951 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 EYSQ5T1H1 3165 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 BECN2A8MW95 431 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 ADAM12O43184 909 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 HUS1O60921 280 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 N4BP1O75113 896 aaKnown RBP11.17□□□□□ -0.62
NR1I3-227ENST00000510951 CNPP09543 421 aaKnown RBP11.17□□□□□ -0.62
NR1I3-227ENST00000510951 ATICP31939 592 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 CDR1P51861 262 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 ARPP19P56211 112 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 YWHAHQ04917 246 aaPredicted RBP11.17□□□□□ -0.62
NR1I3-227ENST00000510951 MAN2A1Q16706 1144 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 WDR72Q3MJ13 1102 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 CTXN3Q4LDR2 81 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 ZNF667Q5HYK9 610 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 OVOS1Q6IE37 1185 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 PDE12Q6L8Q7 609 aaKnown RBP11.17□□□□□ -0.62
NR1I3-227ENST00000510951 ZNF280DQ6N043 979 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 LLGL2Q6P1M3 1020 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 RSPO2Q6UXX9 243 aaPredicted RBP11.17□□□□□ -0.62
NR1I3-227ENST00000510951 ANKS3Q6ZW76 656 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 ADGRF2Q8IZF7 708 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 PDCL2Q8N4E4 241 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 MRPL43Q8N983 215 aaKnown RBP11.17□□□□□ -0.62
NR1I3-227ENST00000510951 FBXL13Q8NEE6 735 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 LNX1Q8TBB1 728 aaPredicted RBP11.17□□□□□ -0.62
NR1I3-227ENST00000510951 TUBGCP2Q9BSJ2 902 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 EMILIN2Q9BXX0 1053 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 HSD3B7Q9H2F3 369 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 TLE6Q9H808 572 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 APOBEC3GQ9HC16 384 aaKnown RBP11.17□□□□□ -0.62
NR1I3-227ENST00000510951 LMCD1Q9NZU5 365 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 GCNT4Q9P109 453 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 MTRRQ9UBK8 725 aa11.17□□□□□ -0.62
NR1I3-227ENST00000510951 ARHGEF37A1IGU5 675 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 SMTNL1A8MU46 457 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 TEX28O15482 410 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 HCRTO43612 131 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 LILRB3O75022 631 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 CLASP2O75122 1294 aaKnown RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 ASS1P00966 412 aaKnown RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 OR4Q2P0C623 313 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 ATP1A3P13637 1013 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 ZNF18P17022 549 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 TYMPP19971 482 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 CDK11BP21127 795 aaKnown RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 EEF1GP26641 437 aaKnown RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 MCCD1P59942 119 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 RBM10P98175 930 aaKnown RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 HYAL1Q12794 435 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 LRMPQ12912 555 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 IQCB1Q15051 598 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 KRT31Q15323 416 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 SOWAHAQ2M3V2 549 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 SGSM1Q2NKQ1 1148 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 MIIPQ5JXC2 388 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 EP400NLQ6ZTU2 488 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 OSTM1Q86WC4 334 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 METTL23Q86XA0 190 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 CCDC150Q8NCX0 1101 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 RNF214Q8ND24 703 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 FAM200AQ8TCP9 573 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 PPP2R3CQ969Q6 453 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 KLHL5Q96PQ7 755 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 TMEM209Q96SK2 561 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 MRPL45Q9BRJ2 306 aaKnown RBP11.16□□□□□ -0.62
NR1I3-227ENST00000510951 CRACR2AQ9BSW2 395 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 GDAP2Q9NXN4 497 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 FBXL5Q9UKA1 691 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 DSEQ9UL01 958 aa11.16□□□□□ -0.62
NR1I3-227ENST00000510951 SSX2IPQ9Y2D8 614 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms