RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 HDGFL2Q7Z4V5 671 aaPredicted RBP8.88□□□□□ -0.99
USP53-206ENST00000510737 STRA8Q7Z7C7 330 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 RNF180Q86T96 592 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 MAPKAPK5Q8IW41 473 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 TMEM132CQ8N3T6 1108 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 MAPRE3Q9UPY8 281 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 TRPM3Q9HCF6 1732 aaPredicted RBP8.88□□□□□ -0.99
USP53-206ENST00000510737 SSH2Q76I76 1423 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 ADCY9O60503 1353 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 MAST3O60307 1309 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 RGPD8O14715 1765 aaPredicted RBP8.87□□□□□ -0.99
USP53-206ENST00000510737 OCA2Q04671 838 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 LRCH2Q5VUJ6 765 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 TSHZ3Q63HK5 1081 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 GPR156Q8NFN8 814 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 OR7D4Q8NG98 312 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 HOXB13Q92826 284 aaPredicted RBP8.87□□□□□ -0.99
USP53-206ENST00000510737 USP7Q93009 1102 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 RNF181Q9P0P0 153 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 ATP11BQ9Y2G3 1177 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 THRAP3Q9Y2W1 955 aaKnown RBP8.87□□□□□ -0.99
USP53-206ENST00000510737 INSL6Q9Y581 213 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 ALS2Q96Q42 1657 aa8.87□□□□□ -0.99
USP53-206ENST00000510737 PHF2O75151 1096 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 PRSS23O95084 383 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 SREBF1P36956 1147 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 ZKSCAN2Q63HK3 967 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 AFMIDQ63HM1 303 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 TGFBRAP1Q8WUH2 860 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 PAWRQ96IZ0 340 aaKnown RBP8.86□□□□□ -0.99
USP53-206ENST00000510737 BCO1Q9HAY6 547 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 VTA1Q9NP79 307 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 PCNTO95613 3336 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 GPRASP1Q5JY77 1395 aa8.86□□□□□ -0.99
USP53-206ENST00000510737 MGST3O14880 152 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 SNRPA1P09661 255 aaKnown RBP8.85□□□□□ -0.99
USP53-206ENST00000510737 CD38P28907 300 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 SESN3P58005 492 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 PPP3CAQ08209 521 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 MPP3Q13368 585 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 ADRM1Q16186 407 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 THNSL2Q86YJ6 484 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 STON2Q8WXE9 905 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 RAX2Q96IS3 184 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 Q96MF0 132 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 ACAP3Q96P50 834 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 LRFN3Q9BTN0 628 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 ALOXE3Q9BYJ1 711 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 IFT22Q9H7X7 185 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 RSAD1Q9HA92 442 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 SIK3Q9Y2K2 1263 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 OVOS2A0A0G2JMS6 1433 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 OVOS2A0A0J9YW53 1432 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 OVOS2Q6IE36 1432 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 PARP4Q9UKK3 1724 aaKnown RBP8.85□□□□□ -0.99
USP53-206ENST00000510737 ROCK1Q13464 1354 aa8.85□□□□□ -0.99
USP53-206ENST00000510737 PAPPAQ13219 1627 aa8.84□□□□□ -0.99
USP53-206ENST00000510737 FOSP01100 380 aaPredicted RBP8.84□□□□□ -0.99
USP53-206ENST00000510737 BLOC1S1P78537 153 aa8.84□□□□□ -0.99
USP53-206ENST00000510737 KCNK18Q7Z418 384 aa8.84□□□□□ -0.99
USP53-206ENST00000510737 BOLLQ8N9W6 283 aaKnown RBP8.84□□□□□ -0.99
USP53-206ENST00000510737 FUBP1Q96AE4 644 aaKnown RBP8.84□□□□□ -0.99
USP53-206ENST00000510737 MRI1Q9BV20 369 aa8.84□□□□□ -0.99
USP53-206ENST00000510737 QRSL1Q9H0R6 528 aaKnown RBP8.84□□□□□ -0.99
USP53-206ENST00000510737 DMRT3Q9NQL9 472 aa8.84□□□□□ -0.99
USP53-206ENST00000510737 IFT172Q9UG01 1749 aa8.84□□□□□ -0.99
USP53-206ENST00000510737 SBF2Q86WG5 1849 aa8.84□□□□□ -0.99
USP53-206ENST00000510737 YTHDC2Q9H6S0 1430 aaKnown RBP8.83□□□□□ -1
USP53-206ENST00000510737 A0A1B0GTW7 788 aa8.83□□□□□ -1
USP53-206ENST00000510737 SLC6A2P23975 617 aa8.83□□□□□ -1
USP53-206ENST00000510737 SP140Q13342 867 aa8.83□□□□□ -1
USP53-206ENST00000510737 UBR7Q8N806 425 aa8.83□□□□□ -1
USP53-206ENST00000510737 LMBR1Q8WVP7 490 aa8.83□□□□□ -1
USP53-206ENST00000510737 NACC2Q96BF6 587 aa8.83□□□□□ -1
USP53-206ENST00000510737 FUBP3Q96I24 572 aaKnown RBP eCLIP8.83□□□□□ -1
USP53-206ENST00000510737 PRAM1Q96QH2 718 aa8.83□□□□□ -1
USP53-206ENST00000510737 AATKQ6ZMQ8 1374 aa8.83□□□□□ -1
USP53-206ENST00000510737 COL24A1Q17RW2 1714 aa8.83□□□□□ -1
USP53-206ENST00000510737 KNDC1Q76NI1 1749 aa8.83□□□□□ -1
USP53-206ENST00000510737 WDR90Q96KV7 1748 aa8.83□□□□□ -1
USP53-206ENST00000510737 FPR1P21462 350 aa8.82□□□□□ -1
USP53-206ENST00000510737 FDXRP22570 491 aa8.82□□□□□ -1
USP53-206ENST00000510737 GUCY1A2P33402 732 aa8.82□□□□□ -1
USP53-206ENST00000510737 MRPS9P82933 396 aaKnown RBP8.82□□□□□ -1
USP53-206ENST00000510737 STRN3Q13033 797 aa8.82□□□□□ -1
USP53-206ENST00000510737 MUM1Q2TAK8 710 aa8.82□□□□□ -1
USP53-206ENST00000510737 NGDNQ8NEJ9 315 aaKnown RBP8.82□□□□□ -1
USP53-206ENST00000510737 LDAHQ9H6V9 325 aa8.82□□□□□ -1
USP53-206ENST00000510737 FBXO34Q9NWN3 711 aa8.82□□□□□ -1
USP53-206ENST00000510737 SLC23A1Q9UHI7 598 aa8.82□□□□□ -1
USP53-206ENST00000510737 LRRC37A3O60309 1634 aa8.82□□□□□ -1
USP53-206ENST00000510737 DHX57Q6P158 1386 aaKnown RBP8.82□□□□□ -1
USP53-206ENST00000510737 ENPP3O14638 875 aa8.81□□□□□ -1
USP53-206ENST00000510737 ZEB2O60315 1214 aa8.81□□□□□ -1
USP53-206ENST00000510737 ULK1O75385 1050 aa8.81□□□□□ -1
USP53-206ENST00000510737 FGFR4P22455 802 aa8.81□□□□□ -1
USP53-206ENST00000510737 ECHS1P30084 290 aa8.81□□□□□ -1
USP53-206ENST00000510737 ALDH1A3P47895 512 aa8.81□□□□□ -1
USP53-206ENST00000510737 SIM1P81133 766 aaPredicted RBP8.81□□□□□ -1
USP53-206ENST00000510737 RRP12Q5JTH9 1297 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms