RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 AKNAD1Q5T1N1 836 aa6.71□□□□□ -1.34
NUP54-209ENST00000510569 PDSS2Q86YH6 399 aa6.71□□□□□ -1.34
NUP54-209ENST00000510569 AOPEPQ8N6M6 819 aa6.71□□□□□ -1.34
NUP54-209ENST00000510569 VKORC1Q9BQB6 163 aa6.71□□□□□ -1.34
NUP54-209ENST00000510569 IMPG2Q9BZV3 1241 aa6.71□□□□□ -1.34
NUP54-209ENST00000510569 SERPINB13Q9UIV8 391 aa6.71□□□□□ -1.34
NUP54-209ENST00000510569 MRFAP1Q9Y605 127 aa6.71□□□□□ -1.34
NUP54-209ENST00000510569 NT5C1B-RDH14C9J2C7 533 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 ADM5C9JUS6 153 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 GABRDO14764 452 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 PPP3CBP16298 524 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 FXR1P51114 621 aaKnown RBP eCLIP6.7□□□□□ -1.34
NUP54-209ENST00000510569 ADKP55263 362 aaKnown RBP6.7□□□□□ -1.34
NUP54-209ENST00000510569 SOX10P56693 466 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 TAPT1Q6NXT6 567 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 ZNF788Q6ZQV5 615 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 SH2D3CQ8N5H7 860 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 TOR1AIP2Q8NFQ8 470 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 KMT5AQ9NQR1 393 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 RLIMQ9NVW2 624 aa6.7□□□□□ -1.34
NUP54-209ENST00000510569 SIDT1Q9NXL6 827 aaKnown RBP6.7□□□□□ -1.34
NUP54-209ENST00000510569 WIPF3A6NGB9 483 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 CGB1A6NKQ9 187 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 TOR1BO14657 336 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 RPLP2P05387 115 aaKnown RBP6.69□□□□□ -1.34
NUP54-209ENST00000510569 GPD1P21695 349 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 ITPKBP27987 946 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 CDKN1CP49918 316 aaPredicted RBP6.69□□□□□ -1.34
NUP54-209ENST00000510569 GUCY2FP51841 1108 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 KRTAP10-11P60412 298 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 ITIH3Q06033 890 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 PCBP2Q15366 365 aaKnown RBP eCLIP6.69□□□□□ -1.34
NUP54-209ENST00000510569 TSHZ1Q6ZSZ6 1077 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 TTC7BQ86TV6 843 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 SLC17A8Q8NDX2 589 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 NSUN7Q8NE18 718 aaKnown RBP6.69□□□□□ -1.34
NUP54-209ENST00000510569 POC1BQ8TC44 478 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 SCAMP4Q969E2 229 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 SPATA31A3Q5VYP0 1347 aa6.69□□□□□ -1.34
NUP54-209ENST00000510569 F2RL2O00254 374 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 CDK11BP21127 795 aaKnown RBP6.68□□□□□ -1.34
NUP54-209ENST00000510569 MALP21145 153 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 HNRNPMP52272 730 aaKnown RBP eCLIP6.68□□□□□ -1.34
NUP54-209ENST00000510569 NXPH1P58417 271 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 DSC2Q02487 901 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 CCDC93Q567U6 631 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 SLC4A10Q6U841 1118 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 PTF1AQ7RTS3 328 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 TRIB1Q96RU8 372 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 SMOQ99835 787 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 SLC13A1Q9BZW2 595 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 CPNE5Q9HCH3 593 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 MAN1C1Q9NR34 630 aa6.68□□□□□ -1.34
NUP54-209ENST00000510569 COL3A1P02461 1466 aaPredicted RBP6.67□□□□□ -1.34
NUP54-209ENST00000510569 LINC00473A8K010 186 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 VWC2LB2RUY7 222 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 CHRM2P08172 466 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 LPOP22079 712 aaPredicted RBP6.67□□□□□ -1.34
NUP54-209ENST00000510569 CYP2C19P33261 490 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 NPTX2P47972 431 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 ITKQ08881 620 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 B3GALNT2Q8NCR0 500 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 MTMR8Q96EF0 704 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 CCDC8Q9H0W5 538 aaPredicted RBP6.67□□□□□ -1.34
NUP54-209ENST00000510569 KLC4Q9NSK0 619 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 ETAA1Q9NY74 926 aa6.67□□□□□ -1.34
NUP54-209ENST00000510569 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.67□□□□□ -1.34
NUP54-209ENST00000510569 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.67□□□□□ -1.34
NUP54-209ENST00000510569 CHEK2O96017 543 aa6.66□□□□□ -1.34
NUP54-209ENST00000510569 SNAPC2Q13487 334 aa6.66□□□□□ -1.34
NUP54-209ENST00000510569 UAP1L1Q3KQV9 507 aa6.66□□□□□ -1.34
NUP54-209ENST00000510569 KHDC1Q4VXA5 237 aaKnown RBP6.66□□□□□ -1.34
NUP54-209ENST00000510569 TSTD2Q5T7W7 516 aa6.66□□□□□ -1.34
NUP54-209ENST00000510569 RNF187Q5TA31 235 aaPredicted RBP6.66□□□□□ -1.34
NUP54-209ENST00000510569 PAPD7Q5XG87 772 aaKnown RBP6.66□□□□□ -1.34
NUP54-209ENST00000510569 FAM9AQ8IZU1 332 aaPredicted RBP6.66□□□□□ -1.34
NUP54-209ENST00000510569 PBKQ96KB5 322 aa6.66□□□□□ -1.34
NUP54-209ENST00000510569 OSBPL9Q96SU4 736 aa6.66□□□□□ -1.34
NUP54-209ENST00000510569 VRK1Q99986 396 aaPredicted RBP6.66□□□□□ -1.34
NUP54-209ENST00000510569 GPR35Q9HC97 309 aa6.66□□□□□ -1.34
NUP54-209ENST00000510569 ADGRA2Q96PE1 1338 aa6.66□□□□□ -1.34
NUP54-209ENST00000510569 A0A0B4J269 797 aa6.65□□□□□ -1.34
NUP54-209ENST00000510569 GCOM1H8Y6P7 765 aaPredicted RBP6.65□□□□□ -1.34
NUP54-209ENST00000510569 POLRMTO00411 1230 aaKnown RBP6.65□□□□□ -1.34
NUP54-209ENST00000510569 KATNA1O75449 491 aa6.65□□□□□ -1.34
NUP54-209ENST00000510569 ATXN1P54253 815 aaKnown RBP6.65□□□□□ -1.34
NUP54-209ENST00000510569 TCF15Q12870 199 aa6.65□□□□□ -1.34
NUP54-209ENST00000510569 TUBB3Q13509 450 aa6.65□□□□□ -1.34
NUP54-209ENST00000510569 EFCAB2Q5VUJ9 269 aa6.65□□□□□ -1.34
NUP54-209ENST00000510569 HASPINQ8TF76 798 aa6.65□□□□□ -1.34
NUP54-209ENST00000510569 BRD9Q9H8M2 597 aa6.65□□□□□ -1.34
NUP54-209ENST00000510569 GNL3LQ9NVN8 582 aaKnown RBP6.65□□□□□ -1.34
NUP54-209ENST00000510569 URI1O94763 535 aaPredicted RBP6.64□□□□□ -1.35
NUP54-209ENST00000510569 ZRANB2O95218 330 aaKnown RBP eCLIP6.64□□□□□ -1.35
NUP54-209ENST00000510569 GJB1P08034 283 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 FTH1P19P0C7X4 201 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 AMPD3Q01432 767 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 ODF1Q14990 250 aa6.64□□□□□ -1.35
NUP54-209ENST00000510569 PNMA8AQ86V59 439 aaPredicted RBP6.64□□□□□ -1.35
NUP54-209ENST00000510569 PRPF38AQ8NAV1 312 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms