RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CDY2AQ9Y6F7 541 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 CDY1Q9Y6F8 540 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 REREQ9P2R6 1566 aa11.09□□□□□ -0.63
NEK1-206ENST00000510533 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.63
NEK1-206ENST00000510533 POLBP06746 335 aa11.08□□□□□ -0.63
NEK1-206ENST00000510533 HSD17B3P37058 310 aa11.08□□□□□ -0.63
NEK1-206ENST00000510533 CORO7P57737 925 aa11.08□□□□□ -0.63
NEK1-206ENST00000510533 FBXW4P57775 412 aa11.08□□□□□ -0.63
NEK1-206ENST00000510533 SNRPFP62306 86 aaKnown RBP11.08□□□□□ -0.63
NEK1-206ENST00000510533 MRPS35P82673 323 aaKnown RBP11.08□□□□□ -0.63
NEK1-206ENST00000510533 BRINP3Q76B58 766 aa11.08□□□□□ -0.63
NEK1-206ENST00000510533 ZNF677Q86XU0 584 aa11.08□□□□□ -0.63
NEK1-206ENST00000510533 GALNT4Q8N4A0 578 aa11.08□□□□□ -0.63
NEK1-206ENST00000510533 PIN4Q9Y237 131 aaKnown RBP11.08□□□□□ -0.63
NEK1-206ENST00000510533 ITM2BQ9Y287 266 aa11.08□□□□□ -0.63
NEK1-206ENST00000510533 HNRNPRO43390 633 aaKnown RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 CST8O60676 142 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 WDR47O94967 919 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 HLA-DRAP01903 254 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 S100A5P33763 92 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 COL23A1Q86Y22 540 aaPredicted RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 EFHBQ8N7U6 833 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 FAM32AQ9Y421 112 aaKnown RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 DAGLAQ9Y4D2 1042 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 ADCY10Q96PN6 1610 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 NDUFB10O96000 172 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 CCDC159P0C7I6 412 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 TXNP10599 105 aaKnown RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 VEPH1Q14D04 833 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 KIZQ2M2Z5 673 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 CCDC92Q53HC0 331 aaPredicted RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 TJAP1Q5JTD0 557 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 KDM7AQ6ZMT4 941 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 PPIL6Q8IXY8 311 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 SERPINB12Q96P63 405 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 NDUFS3O75489 264 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEK1-206ENST00000510533 ATXN3P54252 364 aaPredicted RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 GEMIN4P57678 1058 aaKnown RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 PDK1Q15118 436 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 CDR2LQ86X02 465 aaPredicted RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 SCFD2Q8WU76 684 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 MAP3K20Q9NYL2 800 aaKnown RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 NYAP2Q9P242 653 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 RBP3P10745 1247 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 MRPL28Q13084 256 aaKnown RBP11.08□□□□□ -0.64
NEK1-206ENST00000510533 EMC2Q15006 297 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 C4orf22Q6V702 233 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 B4GALNT2Q8NHY0 566 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 CALML6Q8TD86 181 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 OTULINQ96BN8 352 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 PPP1R2P1Q96PQ5 205 aa11.08□□□□□ -0.64
NEK1-206ENST00000510533 PNPLA6Q8IY17 1366 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 TET3O43151 1660 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 OCM2P0CE71 109 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 OCMP0CE72 109 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 TCN1P20061 433 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 HMGCS2P54868 508 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 CHI3L2Q15782 390 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 REXO1L1PQ8IX06 675 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 VPS33BQ9H267 617 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 GID8Q9NWU2 228 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 TMEM161AQ9NX61 479 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 CNTNAP5Q8WYK1 1306 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 MYO1GB0I1T2 1018 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 CTDNEP1O95476 244 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 UBTFL6P0CB48 400 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 VCAM1P19320 739 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 GPD1P21695 349 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 VHLP40337 213 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 FNTAP49354 379 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 CDC42EP1Q00587 391 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 RAB42Q8N4Z0 105 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 SHCBP1Q8NEM2 672 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 FEZF2Q8TBJ5 459 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 MDM1Q8TC05 714 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 CCT7Q99832 543 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 CARD9Q9H257 536 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 SPDYE5A6NIY4 337 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 RPA1P27694 616 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 BLVRAP53004 296 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 BAATQ14032 418 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 SPDYE7PQ495Y7 208 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 AASDHQ4L235 1098 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 ENGASEQ8NFI3 743 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 GOLPH3Q9H4A6 298 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 ZNF556Q9HAH1 456 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 NOD2Q9HC29 1040 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 GRAP2O75791 330 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 SERPINB3P29508 390 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 HNRNPH1P31943 449 aaKnown RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 MTMR2Q13614 643 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms