RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 TMEM86AQ8N2M4 240 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 LRRC43Q8N309 656 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 RBBP8NLQ8NC74 664 aaPredicted RBP17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 APPL2Q8NEU8 664 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 TRIM43Q96BQ3 446 aaPredicted RBP17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 FAM84AQ96KN4 292 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 CHP1Q99653 195 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 GDF15Q99988 308 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 AJAP1Q9UKB5 411 aaPredicted RBP17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 DSEQ9UL01 958 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 BARX2Q9UMQ3 279 aaPredicted RBP17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 SNX9Q9Y5X1 595 aa17.88■□□□□ 0.45
SCAMP1-203ENST00000510030 TMEM189-UBE2V1I3L0A0 370 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 RBAK-RBAKDNI3L0D1 243 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 MED7O43513 233 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 TRAPPC3O43617 180 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 POMCP01189 267 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 ACO1P21399 889 aaKnown RBP17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 GUCY2FP51841 1108 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 LILRA4P59901 499 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 FPGSQ05932 587 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 SOX4Q06945 474 aaPredicted RBP17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 STILQ15468 1287 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 UPP1Q16831 310 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 CLLU1OSQ5K130 101 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 E4F1Q66K89 784 aaPredicted RBP17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 DCLRE1AQ6PJP8 1040 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 UBR7Q8N806 425 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 EPS8L1Q8TE68 723 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 KAT5Q92993 513 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 ARID3AQ99856 593 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 TSGA10Q9BZW7 698 aa17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 MTIF3Q9H2K0 278 aaKnown RBP17.87■□□□□ 0.45
SCAMP1-203ENST00000510030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.87■□□□□ 0.457e-6■■■■■ 74.5
SCAMP1-203ENST00000510030 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 CYP26A1O43174 497 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 KIF4AO95239 1232 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 TUBB4AP04350 444 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 ODC1P11926 461 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 CSF2RAP15509 400 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 CYP11B1P15538 503 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 TNFAIP3P21580 790 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 GNA15P30679 374 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 ZNF132P52740 706 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 CDR2Q01850 454 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 DSC1Q08554 894 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 RAD9BQ6WBX8 426 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 SCARA5Q6ZMJ2 495 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 Q7L0L9 218 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 AGPAT1Q99943 283 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 TMEM175Q9BSA9 504 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 NT5C1AQ9BXI3 368 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 TBC1D13Q9NVG8 400 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 CEP83Q9Y592 693 aa17.86■□□□□ 0.45
SCAMP1-203ENST00000510030 CILPO75339 1184 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 CD58P19256 250 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 CLCN1P35523 988 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 CLCNKBP51801 687 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 ASTE1Q2TB18 679 aaPredicted RBP17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 CRIPAKQ8N1N5 446 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 TET1Q8NFU7 2136 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 TNIP3Q96KP6 325 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 CXCL16Q9H2A7 254 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 PDCL3Q9H2J4 239 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 SNX25Q9H3E2 840 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 INTUQ9ULD6 942 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 PYCARDQ9ULZ3 195 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 PPP2R2CQ9Y2T4 447 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 ADGRG1Q9Y653 693 aa17.85■□□□□ 0.45
SCAMP1-203ENST00000510030 KRT86O43790 486 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 B3GAT3O94766 335 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 WEE2P0C1S8 567 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 FGFR1P11362 822 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 GZMAP12544 262 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 LHX1P48742 406 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 AARSP49588 968 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 ELAVL2Q12926 359 aaKnown RBP17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 DSTYKQ6XUX3 929 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 ZNF662Q6ZS27 426 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 ZNF571Q7Z3V5 609 aaPredicted RBP17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 KIAA1328Q86T90 577 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 METTL23Q86XA0 190 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 CCAR2Q8N163 923 aaKnown RBP17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 TOP1MTQ969P6 601 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 LBHD1Q9BQE6 289 aaPredicted RBP17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 COLEC11Q9BWP8 271 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 SMYD3Q9H7B4 428 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 GOLGA2P5Q9HBQ8 144 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 MIOSQ9NXC5 875 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 ADAMTS1Q9UHI8 967 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 NOCTQ9UK39 431 aaKnown RBP17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 POLIQ9UNA4 740 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 SCN1AP35498 2009 aa17.84■□□□□ 0.45
SCAMP1-203ENST00000510030 CASTOR2A6NHX0 329 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 KIF2AO00139 706 aaPredicted RBP17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 CYB561D2O14569 222 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 LSM8O95777 96 aaKnown RBP17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 FGBP02675 491 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms